Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_K07
(558 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 32 0.066
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 29 0.61
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 28 0.81
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 1.4
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 27 2.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.3
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 4.3
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 26 4.3
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 26 4.3
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 25 5.7
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 25 5.7
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 25 5.7
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 7.5
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.5
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 25 7.5
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 25 7.5
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 25 7.5
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 25 10.0
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 25 10.0
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 25 10.0
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 25 10.0
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 10.0
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 10.0
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 31.9 bits (69), Expect = 0.066
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 192 LKATTNPFLK---PSPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGA-NVASRNVN 359
LK TT+PF+ PS E+ KE D EN++NE + + +F A N N+
Sbjct: 29 LKKTTSPFILTAYPSNEEKEVKETDIVPDENKVNELDVHKQSTEFSKQESASNDDDTNIQ 88
Query: 360 AVPATN 377
+P N
Sbjct: 89 LIPENN 94
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 28.7 bits (61), Expect = 0.61
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +3
Query: 171 SVLRPPQLKATTNPFLKPSPI----EESGKEKDKEASENRLNESKENIEVPQFVPLGGAN 338
S + P K TNP S I + KEKDK++ + N S E+P F ++
Sbjct: 412 SSTKAPLTKQQTNPSTPLSSIMAGLKGREKEKDKDSGISSENVSNNREELPSFRKRSSSS 471
Query: 339 VASRNVNAVPATNS 380
S + ++ A N+
Sbjct: 472 RQSEEIASLQAENA 485
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.3 bits (60), Expect = 0.81
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Frame = +3
Query: 189 QLKATTNPFLKPSPIEESGKEKDKEASENRLNESKENIEVPQ--FVPLGGA-----NVAS 347
++K N L S E+ + K+ EN+++ + P+ VP G S
Sbjct: 89 EIKQKDNEILFSST-EDINQHKENYQDENKIDLLDVALANPKDCVVPSSGLLMPKEEFIS 147
Query: 348 RNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAAS 527
+PATNS + ++E V N + G++SA S S+ +E + +
Sbjct: 148 NEEVGIPATNSSEKSNVKIADEIAE--VTHSNSSIGKSSADLSSDSSSDSESNTSFSETD 205
Query: 528 VXENNQESES 557
V E E +S
Sbjct: 206 VEEEKAEEKS 215
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 234 EESGKEKDKEASENRLNESKENIEVP 311
E G E++KEA E + E +N EVP
Sbjct: 24 ERLGAEREKEAVERIVQEENQNPEVP 49
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 201 TTNPFLKPSPIEESGKEKDKEASE-NRLNESKENIEVP 311
+TNPFL + IE S + +A++ N+ + +IE+P
Sbjct: 61 STNPFLADTRIENSPLGSESKANQLNKQGTNVNHIEIP 98
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 246 KEKDKEASENRLNESKENIE 305
KEK KE EN+LNE + I+
Sbjct: 1603 KEKTKEELENQLNEKSQRIK 1622
Score = 25.8 bits (54), Expect = 4.3
Identities = 19/74 (25%), Positives = 27/74 (36%)
Frame = +3
Query: 246 KEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSER 425
K +D + +L E+ EN+ P S P T+ P A GQN +E
Sbjct: 1684 KTRDLQNKITQLEETIENLNKQLSNPEKTDESTSSVTETKPVTSKPTASKADVGQNATEA 1743
Query: 426 VVIKENGNNGEASA 467
K + SA
Sbjct: 1744 SSAKREPSGKSLSA 1757
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 4.3
Identities = 20/82 (24%), Positives = 31/82 (37%)
Frame = +3
Query: 303 EVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSS 482
E+ +PL AN A+ VPA+ AA V G + + N + A +
Sbjct: 228 ELVGHIPLRAANYANEYSQDVPASTHRAASELVHGVPMRASGI---NDPKHDLDAATRHN 284
Query: 483 SNGTTELLFTNAAASVXENNQE 548
N + A + V E +E
Sbjct: 285 INSVAAASYVAARSRVIEEEEE 306
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 208 IHSLSQAQLKNQERRKTKKLLKTDSMN 288
+ ++ +A K E RKT+K LKTDS N
Sbjct: 1141 VDTILEALRKIIELRKTEKTLKTDSDN 1167
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 4.3
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 225 SPIEESGKEKD-KEASENRLNESKENI-EVPQFVPLGGANVASRNVNAVPATNSPAAPSF 398
+PIEES + + S +++ES + +V + N S+N N + +SP
Sbjct: 329 TPIEESKEPITVRRDSVIQIDESSAGLTDVISELNFTNHNDDSKNSNITTSNDSPVNEVE 388
Query: 399 VFGQNLSERVVIKENGNNGEASATEHSSSNGTTELL 506
LS VV K+ + E+ + ++N + E L
Sbjct: 389 PMAPELSSAVVEKKEPEDYESISAVDENTNDSNESL 424
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 437 FNNYPFTKILTKHKTRCGWAVGCWHRIYIARSHIC 333
F+N+ FT + R +AV C +YI + C
Sbjct: 374 FSNFSFTSVSFNLPYRMVFAVACQDAVYIYDTQTC 408
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +3
Query: 270 ENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFV 401
ENR +E P+ + A + + VP+ S +A S++
Sbjct: 893 ENRAESKVHTLETPKVISARPAESVKQPLTPVPSMTSQSAQSYI 936
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 5.7
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +3
Query: 285 ESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEAS 464
E + +PQ V L + +++ N P TN+P S + +L + NNG
Sbjct: 98 ERTSEVSLPQTVNL--SEISNNNDKGQP-TNTPPVRSTIVAPSLYSEGSTLNHYNNGSHQ 154
Query: 465 ATEHSSSNGT 494
NGT
Sbjct: 155 VLHPQFQNGT 164
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 414 DFDQTQN*VRLGCWLLAPHLHCEKP 340
+ + QN + L C L PHL CE P
Sbjct: 93 NLENLQNLLYLHCDLNRPHLSCELP 117
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.0 bits (52), Expect = 7.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 360 AVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSSS 485
A P N ++ +N +R KENG+ GEA + +S S
Sbjct: 2369 AFPNRNESDGFPHIYSRNHDKR---KENGSQGEADNSNYSGS 2407
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 384 LGCWLLAPHLHCEKPHL 334
LG LL LHCEK H+
Sbjct: 465 LGAQLLEEMLHCEKQHI 481
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 107 SEAWPIPFWFVMFHC--TYLLGVFSCFAS 27
S WP F+ F LLG+ SCFAS
Sbjct: 112 SSLWPKIISFLAFRSKDVVLLGIVSCFAS 140
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 190 N*KRQLIHSLSQAQLKNQERRKTKKLLKTDSMNP 291
N K++ HS S++ K+ RRK +K K + NP
Sbjct: 1125 NLKQKKTHS-SKSDKKSSRRRKNEKRRKLNEQNP 1157
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 24.6 bits (51), Expect = 10.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 216 LKPSPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAP 392
+KPS + +EK + N+ N E+ E+ VPL N + N + +P P
Sbjct: 256 IKPSKQNKQKEEKKTISQGNKPNSRDEDSELSIDVPLSMLNRSLANNSQKNKKRTPNKP 314
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 24.6 bits (51), Expect = 10.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 102 GLANTILVCDVPLHISP 52
GLA T+L C VP+ + P
Sbjct: 442 GLALTVLTCSVPIVLGP 458
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 24.6 bits (51), Expect = 10.0
Identities = 20/111 (18%), Positives = 47/111 (42%)
Frame = +3
Query: 225 SPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVF 404
S G + +S + S E+ + + +S + ++ +++ + S
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSE 214
Query: 405 GQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVXENNQESES 557
G + S E+ ++ E + + SSS+ +E ++ +S ++ ESES
Sbjct: 215 GSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 265
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 24.6 bits (51), Expect = 10.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 208 LVVAFNCGGRSTEPKG 161
L + NCGG T+P+G
Sbjct: 239 LAIIINCGGVPTDPRG 254
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 24.6 bits (51), Expect = 10.0
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 393 SFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTE 500
SF+F + + + +E+ ++GE SA +HSS+ T +
Sbjct: 860 SFMFKEQDANKK--REDFHSGEVSAIQHSSAQNTLD 893
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 24.6 bits (51), Expect = 10.0
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +3
Query: 294 ENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATE 473
ENI + PLG N+A R N +P P ++ N ++ + NNG AS +
Sbjct: 845 ENITMS--APLGYVNIAVRGGNIIP-LQQPGYTTYESRNNPYSLLIAMD--NNGFASGSL 899
Query: 474 HSSSNGTTELLFTNAAASVXENNQES 551
+ + + TN++ SV N+ +
Sbjct: 900 YIDDGISMQ---TNSSLSVKLNSNSN 922
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,344,225
Number of Sequences: 5004
Number of extensions: 46904
Number of successful extensions: 194
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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