Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_K07
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   1.6  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   3.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   3.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   4.8  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   4.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.4  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +1

Query: 1   EKMKKSTMEDAKQEKTPRRYVQWNITNQNGIG 96
           E  K S + +++    P  Y++WN+T+   +G
Sbjct: 240 ENDKMSWLFESEDVLLPSVYLRWNLTSGERVG 271


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 212 WISCRFQLWRA*H*TKRIICF 150
           WI C F +W+    T +++ F
Sbjct: 217 WIMCYFCIWKGVKWTGKVVYF 237


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 212 WISCRFQLWRA*H*TKRIICF 150
           WI C F +W+    T +++ F
Sbjct: 270 WIMCYFCIWKGVKWTGKVVYF 290


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 16  STMEDAKQEKTPRRY 60
           ST ED+++  TP+R+
Sbjct: 395 STQEDSEEHLTPKRF 409


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 16  STMEDAKQEKTPRRY 60
           ST ED+++  TP+R+
Sbjct: 395 STQEDSEEHLTPKRF 409


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +3

Query: 162 PFGSVLRPPQLKATTNPFLKPSPIE--ESGKEKD 257
           PFG V       + + PF+  +PIE   SG  +D
Sbjct: 298 PFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQD 331


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +3

Query: 162 PFGSVLRPPQLKATTNPFLKPSPIE--ESGKEKD 257
           PFG V       + + PF+  +PIE   SG  +D
Sbjct: 298 PFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQD 331


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +3

Query: 234 EESGKEKDKEASENRLNESKEN 299
           + + K+     ++NR N++K+N
Sbjct: 450 QNANKQNGNRQNDNRQNDNKQN 471


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,963
Number of Sequences: 438
Number of extensions: 3342
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)