Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_K03
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 95 1e-20
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 50 3e-07
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 46 4e-06
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 46 5e-06
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 46 6e-06
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 45 1e-05
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 44 3e-05
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 42 6e-05
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 42 8e-05
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 42 1e-04
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 39 7e-04
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 38 0.001
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 38 0.001
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 38 0.002
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 36 0.005
SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 33 0.027
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 33 0.036
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 31 0.11
SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein Usp102|Schi... 31 0.19
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 30 0.25
SPBC428.12c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 29 0.44
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 29 0.77
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 29 0.77
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 28 1.4
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 28 1.4
SPCC550.02c |cwf5|ecm2|RNA-binding protein Cwf5|Schizosaccharomy... 27 2.4
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 2.4
SPBC887.15c |||sphingosine hydroxylase |Schizosaccharomyces pomb... 27 2.4
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 27 3.1
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 26 5.5
SPBP8B7.14c |dpb2||DNA polymerase epsilon catalytic subunit b Dp... 25 7.2
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 25 7.2
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 25 9.5
SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomy... 25 9.5
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 94.7 bits (225), Expect = 1e-20
Identities = 48/141 (34%), Positives = 72/141 (51%)
Frame = +2
Query: 230 RDPIPYLPPAAKLPHEKKQKGYDGVGAFLSCFEHPSXXXXXXXXXXXXXXXXXXXXXKAE 409
R P+ YLPP P ++ G+ +L + S K +
Sbjct: 16 RPPLRYLPPMDVPPEKRSTPRVSGIAKYLKYAQ--SHDQQYHPTESLEEKRLRLRDEKQK 73
Query: 410 QIAYKLEQEIALWDPSSNPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVY 589
Q +L I +WDP + V DP+KT+F++R++YDT ES + REF YG I++I +V
Sbjct: 74 QQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVR 133
Query: 590 DKENGKPRGYAFIEYEHERDM 652
+K GK GYAF+ +E ERD+
Sbjct: 134 NKVTGKSMGYAFVVFERERDL 154
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +2
Query: 479 DPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERD 649
D TL V ++ DT E +LR F +G I+++++ DKE G+ +G+AF+ Y ++RD
Sbjct: 199 DDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSY-YDRD 254
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 46.4 bits (105), Expect = 4e-06
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +2
Query: 488 KTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERD 649
K LF+ + Y +E L+ F +G ++++HM DK+ P+G+A+I++ H+ D
Sbjct: 323 KRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDF-HDAD 375
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 46.0 bits (104), Expect = 5e-06
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +2
Query: 464 PKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHE 643
P+ + +FV V D +E + R F +G + ++ DK+ G+PRG+ F+ YE+E
Sbjct: 239 PREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENE 298
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 45.6 bits (103), Expect = 6e-06
Identities = 17/60 (28%), Positives = 37/60 (61%)
Frame = +2
Query: 458 SNPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYE 637
+ P ++ T+FV R++++ + L +EFE YG I ++ D ++G+ +GY ++++E
Sbjct: 253 TKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFE 312
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 44.8 bits (101), Expect = 1e-05
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHER 646
+++ +++D +E + F +G I++V DKE GK +G+AF++YE +R
Sbjct: 33 IYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYEDQR 83
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 479 DPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
+P ++V + Y+ +E ++ F+ G +K +V D E+G+P+GY F EY
Sbjct: 2 NPSCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEY 53
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 42.3 bits (95), Expect = 6e-05
Identities = 17/58 (29%), Positives = 36/58 (62%)
Frame = +2
Query: 461 NPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
N K + D ++++V V+Y + +L+ F G++ ++ ++ DK G P+G+A+IE+
Sbjct: 47 NDKESIDA-QSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEF 103
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 41.9 bits (94), Expect = 8e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
+FV + YD SE ++ F G +K +V D E G +GY F E+
Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEF 55
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 476 ADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERDM 652
A P LFV ++N T + L F +G I ++ DKE G YAFIE++++ +
Sbjct: 240 APPENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESV 298
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 38.7 bits (86), Expect = 7e-04
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
LFV + D+S L+ F+ G + + + DK +G+ +GYAF+E+
Sbjct: 94 LFVGNLPKDSSVETLQLHFKRAGQVPSVRIPTDKTSGRQKGYAFVEF 140
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/53 (26%), Positives = 34/53 (64%)
Frame = +2
Query: 482 PFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEH 640
PF L V+ ++++ ++ ++ FE +G I+ +H+ D +N + +G+ +I+Y +
Sbjct: 338 PFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQN-RSKGFGYIQYRN 389
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 37.9 bits (84), Expect = 0.001
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
+ V V+ + +E ++ F +G +K +H+ D+ G +GYA IEY
Sbjct: 12 IIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEY 58
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYE 637
L+V R+ + E ++R F +G + ++ M +++ G + YAFIE+E
Sbjct: 107 LYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFE 154
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYE 637
LFV + D ++ L + F Y ++ K +V D+E GK RG+ F+ ++
Sbjct: 32 LFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDRE-GKTRGFGFVSFK 78
>SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 33.5 bits (73), Expect = 0.027
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 455 SSNPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
SS + +P +T+ V + + ++ + F YG I I M K++ +GY +IEY
Sbjct: 88 SSLSRSPEEPLRTILVENLTRNVTKEHIAEIFGIYGLIDHIFMPIYKKSELNKGYCYIEY 147
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 33.1 bits (72), Expect = 0.036
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 494 LFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYE 637
LFV ++ E L F G + K V ENG+ +GY F+ Y+
Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYD 148
Score = 29.1 bits (62), Expect = 0.59
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 491 TLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERDM 652
T+++ ++ ++S L G + IH+ D+ G+ F E+ HE+D+
Sbjct: 12 TIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDV 65
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 470 VTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYE 637
+ ++P T V +++D +E+ L +F G G + I +V D + RG+ ++E+E
Sbjct: 88 IPSEPPFTAHVGNLSFDLTENDLG-DFFGEG-VTSIRLVIDPLTERSRGFGYVEFE 141
>SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein
Usp102|Schizosaccharomyces pombe|chr 2|||Manual
Length = 249
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 482 PFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERD 649
P K L + + + + L + FE + +++ MV + RG AF+EY+ +R+
Sbjct: 172 PNKVLLLQNIPQEVNADVLTQIFEAFSGFQEVRMVPGR-----RGIAFVEYDSDRE 222
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = +2
Query: 449 DPSSNPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFI 628
+P S P+ + + LFV+ + E +L++ F +G + + ++ + RG+ F+
Sbjct: 88 EPQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFL 147
Query: 629 EY 634
+
Sbjct: 148 SF 149
>SPBC428.12c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 116
Score = 29.5 bits (63), Expect = 0.44
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 491 TLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERD 649
T+ V + +ES L F +G I + + + KE R YAF+E++ D
Sbjct: 7 TVHVGNLAPSVTESLLYNAFIPFGEIISVAL-HRKEKAVDRSYAFVEFDEPED 58
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 28.7 bits (61), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 297 SYPFCFFSCGSFAAGGRYGMGSRAANKANKFGGKNC 190
S+ C S + A G +G AAN A KFG ++C
Sbjct: 188 SHKVCVISYSAKFASGFFGPFRAAANGAPKFGDRSC 223
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 28.7 bits (61), Expect = 0.77
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 488 KTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEYEHERD 649
+TL+V +L EFE +G + + + + R +AF+EYE RD
Sbjct: 7 RTLYVTGFRDGMRARELAYEFEPFGPLIRCDIPIPRTRTS-RPFAFVEYEDSRD 59
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 491 TLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKEN-----GKPRGYAFIEYEHE 643
+++V + S L FE +G K HM+ K+N P +AFI +E++
Sbjct: 21 SIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENK 76
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 452 PSSNPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGK 607
PS +P K+ VAR + + +K + F G + K + + DKENG+
Sbjct: 206 PSRSPSPMLSKKKS--VARASENEPSAKQNKSFSGNDSHKSLTDIRDKENGE 255
>SPCC550.02c |cwf5|ecm2|RNA-binding protein Cwf5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 354
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 491 TLFVARVNYDTSESKLRREFEGYGAIKKI 577
+LF+ V + ++ K+R+ FE YG +K +
Sbjct: 213 SLFLIGVEDELADYKIRKHFEQYGPLKSV 241
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 449 DPSSNPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENG 604
DP+ P +TLF+ + E LR FE +G+++ + + ++ +G
Sbjct: 393 DPTIPPDSIKVYSRTLFLGGITRSVREPVLRSMFERFGSVQSLILNHNYRHG 444
>SPBC887.15c |||sphingosine hydroxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 293
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 245 YLPPAAKLPHEKKQK 289
Y+PP ++ P+EKKQK
Sbjct: 271 YMPPKSETPYEKKQK 285
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = -2
Query: 382 NAFFSRLHSCWWRSFRGMLKAAKESADSIVSFLFFFVRKL 263
N + ++ + WW+ + L AA ++ + + FF +L
Sbjct: 704 NYYLKKIFADWWQKYNFTLSAALDTGTQLSVIILFFCLQL 743
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +2
Query: 491 TLFVARVNYDTSESKLRREFEGYGAIKKIHMVYDKENGKPRGYAFIEY 634
TL++ + +E+ +++ + G K+ ++ ++ G GY F+E+
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEF 141
>SPBP8B7.14c |dpb2||DNA polymerase epsilon catalytic subunit b Dpb2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 291 PFCFFSCGSFAAGGRYGMGS 232
PFC CGSF + + GS
Sbjct: 363 PFCIILCGSFMSSAFHNSGS 382
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 590 DKENGKPRGYAFIEYEH 640
DK +G+PRGY +E H
Sbjct: 239 DKASGQPRGYVLLEPMH 255
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 416 AYKLEQEIALWDPSS-NPKVTADPFKTLFVARVNYDTSESKLRREFEGYGAIKKIHMVYD 592
++ + Q I P++ NP P T++V + TSE +L+ F K++
Sbjct: 401 SHGIHQRIPASTPTNTNPADQNPPCNTIYVGNLPPSTSEEELKVLFSTQVGYKRL-CFRT 459
Query: 593 KENGKPRGYAFIEYEH 640
K NG F+E+E+
Sbjct: 460 KGNGP---MCFVEFEN 472
>SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 211
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 358 SCWWRSFRGMLKAAKESAD 302
S WWR R +L+ K+S D
Sbjct: 25 SVWWRHVRMLLRRLKQSLD 43
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,567,902
Number of Sequences: 5004
Number of extensions: 47687
Number of successful extensions: 150
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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