Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_J14
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p pro...   120   1e-27
AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA...   120   1e-27
AY118556-1|AAM49925.1|  708|Drosophila melanogaster LD36089p pro...   113   2e-25
AE014296-764|AAG22245.1|  708|Drosophila melanogaster CG14991-PB...   113   2e-25
AE014296-763|AAF47838.1|  708|Drosophila melanogaster CG14991-PA...   113   2e-25

>AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p
           protein.
          Length = 715

 Score =  120 bits (290), Expect = 1e-27
 Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
 Frame = +1

Query: 142 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKXDWSDHALWWPTRNX 321
           VG+ SWNL I++TDL  ++TM V+GD HIGG+ML+L +    E   DWSDHALWWP RN 
Sbjct: 4   VGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVD---PENPKDWSDHALWWPARNV 60

Query: 322 WLSSTKTHXXXXXXXXXXXXTLHAHAQTTKNPAAGLEIHRLQTLTSQLTHS----APFIQ 489
           WLS TK               LH    T  +    +++  L+ L S++ +S    +  + 
Sbjct: 61  WLSRTK--LTLDQCGVQADSLLHF---TPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVN 115

Query: 490 LCKNLGIRHSEELSLCYPLEASHLKQ 567
           LCK L IR+ EELSLC PLEA HLK+
Sbjct: 116 LCKQLDIRYPEELSLCKPLEAEHLKR 141



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +2

Query: 338 KHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCK 448
           K TLDQ GV AD+ LHFTPMHK LR+QLPDLR++D +
Sbjct: 66  KLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSR 102


>AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA
           protein.
          Length = 715

 Score =  120 bits (290), Expect = 1e-27
 Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
 Frame = +1

Query: 142 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKXDWSDHALWWPTRNX 321
           VG+ SWNL I++TDL  ++TM V+GD HIGG+ML+L +    E   DWSDHALWWP RN 
Sbjct: 4   VGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVD---PENPKDWSDHALWWPARNV 60

Query: 322 WLSSTKTHXXXXXXXXXXXXTLHAHAQTTKNPAAGLEIHRLQTLTSQLTHS----APFIQ 489
           WLS TK               LH    T  +    +++  L+ L S++ +S    +  + 
Sbjct: 61  WLSRTK--LTLDQCGVQADSLLHF---TPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVN 115

Query: 490 LCKNLGIRHSEELSLCYPLEASHLKQ 567
           LCK L IR+ EELSLC PLEA HLK+
Sbjct: 116 LCKQLDIRYPEELSLCKPLEAEHLKR 141



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +2

Query: 338 KHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCK 448
           K TLDQ GV AD+ LHFTPMHK LR+QLPDLR++D +
Sbjct: 66  KLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSR 102


>AY118556-1|AAM49925.1|  708|Drosophila melanogaster LD36089p
           protein.
          Length = 708

 Score =  113 bits (272), Expect = 2e-25
 Identities = 59/142 (41%), Positives = 77/142 (54%)
 Frame = +1

Query: 142 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKXDWSDHALWWPTRNX 321
           VG+ +WNL I +TDL  ++T+ VKGD HIGGVML L +    E   DWSDHALWWP +N 
Sbjct: 4   VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVD---PELPKDWSDHALWWPAKNI 60

Query: 322 WLSSTKTHXXXXXXXXXXXXTLHAHAQTTKNPAAGLEIHRLQTLTSQLTHSAPFIQLCKN 501
           WL+ T++                   +T +     L     +   S  T  A  + LCK+
Sbjct: 61  WLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGA-VVSLCKD 119

Query: 502 LGIRHSEELSLCYPLEASHLKQ 567
           L IR+ EELS C PLE  HLK+
Sbjct: 120 LDIRYPEELSFCKPLEPEHLKK 141



 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +2

Query: 338 KHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFID 442
           + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D
Sbjct: 66  RSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLD 100


>AE014296-764|AAG22245.1|  708|Drosophila melanogaster CG14991-PB,
           isoform B protein.
          Length = 708

 Score =  113 bits (272), Expect = 2e-25
 Identities = 59/142 (41%), Positives = 77/142 (54%)
 Frame = +1

Query: 142 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKXDWSDHALWWPTRNX 321
           VG+ +WNL I +TDL  ++T+ VKGD HIGGVML L +    E   DWSDHALWWP +N 
Sbjct: 4   VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVD---PELPKDWSDHALWWPAKNI 60

Query: 322 WLSSTKTHXXXXXXXXXXXXTLHAHAQTTKNPAAGLEIHRLQTLTSQLTHSAPFIQLCKN 501
           WL+ T++                   +T +     L     +   S  T  A  + LCK+
Sbjct: 61  WLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGA-VVSLCKD 119

Query: 502 LGIRHSEELSLCYPLEASHLKQ 567
           L IR+ EELS C PLE  HLK+
Sbjct: 120 LDIRYPEELSFCKPLEPEHLKK 141



 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +2

Query: 338 KHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFID 442
           + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D
Sbjct: 66  RSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLD 100


>AE014296-763|AAF47838.1|  708|Drosophila melanogaster CG14991-PA,
           isoform A protein.
          Length = 708

 Score =  113 bits (272), Expect = 2e-25
 Identities = 59/142 (41%), Positives = 77/142 (54%)
 Frame = +1

Query: 142 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKXDWSDHALWWPTRNX 321
           VG+ +WNL I +TDL  ++T+ VKGD HIGGVML L +    E   DWSDHALWWP +N 
Sbjct: 4   VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVD---PELPKDWSDHALWWPAKNI 60

Query: 322 WLSSTKTHXXXXXXXXXXXXTLHAHAQTTKNPAAGLEIHRLQTLTSQLTHSAPFIQLCKN 501
           WL+ T++                   +T +     L     +   S  T  A  + LCK+
Sbjct: 61  WLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGA-VVSLCKD 119

Query: 502 LGIRHSEELSLCYPLEASHLKQ 567
           L IR+ EELS C PLE  HLK+
Sbjct: 120 LDIRYPEELSFCKPLEPEHLKK 141



 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +2

Query: 338 KHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFID 442
           + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D
Sbjct: 66  RSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLD 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,249,831
Number of Sequences: 53049
Number of extensions: 499412
Number of successful extensions: 1011
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)