Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_J14
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   3.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.6  
AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly pro...    21   8.6  
AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly pro...    21   8.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 193 KRTMVVKGDMHIGGVML 243
           K+  VV+GD+ +GG+M+
Sbjct: 108 KKEAVVEGDLVLGGLMM 124


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 420 SWILSGLCMGVKCRAASA*T 361
           +W+L  +C+G+ C+  ++ T
Sbjct: 3   TWLLLVVCLGIACQGITSVT 22


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 197 RFSFRSVT*IVRFHDPSPTISPSANIFTS 111
           R+S R  + IV    PS + SPS ++ TS
Sbjct: 23  RYSKRFSSSIVDRRSPSSSRSPSPSLLTS 51


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -2

Query: 308 GHQRAWSDQSXLNSLPKL---SVSFSITPPMCMSPLTTIVRFSFRSVT*IVRFHDPSPTI 138
           G  ++WSD+S  N+L  L   ++S +        P +T+ + + R    +    + SPT 
Sbjct: 460 GPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTT 519

Query: 137 SPSANI 120
              A++
Sbjct: 520 WSPADL 525


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 417 WILSGLCMGVKCR 379
           W+L  +C+G+ C+
Sbjct: 4   WLLLMVCLGIACQ 16


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 417 WILSGLCMGVKCR 379
           W+L  +C+G+ C+
Sbjct: 4   WLLLVVCLGIACQ 16


>AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly
           protein MRJP4 protein.
          Length = 27

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 417 WILSGLCMGVKCR 379
           W+L  +C+G+ C+
Sbjct: 4   WLLLMVCLGIACQ 16


>AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly
           protein MRJP3 protein.
          Length = 31

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 417 WILSGLCMGVKCR 379
           W+L  +C+G+ C+
Sbjct: 4   WLLLVVCLGIACQ 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,441
Number of Sequences: 438
Number of extensions: 2810
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)