Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_J13
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   2.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   8.3  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 183 IFNQRTSLKRSVLIYKPVDVHCFYYHN 263
           IF    S   + L Y P+  H  YY N
Sbjct: 254 IFGMALSPVTNNLYYSPLTSHSLYYVN 280


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 53  GKDALGKPFR 24
           GKD LGKP R
Sbjct: 537 GKDELGKPSR 546


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 95  RHTFEFPKTCSAVKGKDALG 36
           RH  E PK  SAV+    +G
Sbjct: 156 RHLAETPKNTSAVRYTHYIG 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,501
Number of Sequences: 438
Number of extensions: 1298
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)