Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_J05
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 150 7e-37
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 150 7e-37
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 77 1e-14
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 65 5e-11
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 58 5e-09
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 58 5e-09
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 51 8e-07
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 51 8e-07
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 51 8e-07
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 48 4e-06
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 48 4e-06
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 28 6.6
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 28 6.6
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 150 bits (364), Expect = 7e-37
Identities = 76/138 (55%), Positives = 95/138 (68%)
Frame = +1
Query: 232 RNGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPR 411
++GNVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPR
Sbjct: 58 KDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPR 117
Query: 412 IITEGFDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVL 591
I+TEGF+ A K+LE+LE K + R+ LV+V RT+L+TK+H LAD +T+ VDAVL
Sbjct: 118 IVTEGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVL 177
Query: 592 TIRTPGKPVDLHMVEIME 645
IR G+ DLHMVE ME
Sbjct: 178 AIRRDGEEPDLHMVEKME 195
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 59 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLG 175
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLG 39
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 171 LXPKGTMKMLVSGAGDIKITKE 236
L PKGT+KMLVSGAGDIK+TK+
Sbjct: 38 LGPKGTLKMLVSGAGDIKLTKD 59
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 150 bits (364), Expect = 7e-37
Identities = 76/138 (55%), Positives = 95/138 (68%)
Frame = +1
Query: 232 RNGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPR 411
++GNVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPR
Sbjct: 58 KDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPR 117
Query: 412 IITEGFDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVL 591
I+TEGF+ A K+LE+LE K + R+ LV+V RT+L+TK+H LAD +T+ VDAVL
Sbjct: 118 IVTEGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVL 177
Query: 592 TIRTPGKPVDLHMVEIME 645
IR G+ DLHMVE ME
Sbjct: 178 AIRRDGEEPDLHMVEKME 195
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 59 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLG 175
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLG 39
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 171 LXPKGTMKMLVSGAGDIKITKE 236
L PKGT+KMLVSGAGDIK+TK+
Sbjct: 38 LGPKGTLKMLVSGAGDIKLTKD 59
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G ++ +M +QH A L+ V+L G LL++A+ I G+HP
Sbjct: 74 DGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIK 133
Query: 415 ITEGFDIARNKSLEVLESM--KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAV 588
I +GFD+A K+LE L+S+ K P+E RE LV+ A+TSL +K+ + VDAV
Sbjct: 134 IADGFDLACKKALETLDSISDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAV 192
Query: 589 LTIR-TPGKPVDLHMVEI 639
L++ K V+ M+++
Sbjct: 193 LSVADIESKDVNFEMIKM 210
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSGAGDIKITKE 236
+ +L P+G KMLVS GD+ IT +
Sbjct: 50 RTSLGPRGLDKMLVSPDGDVTITND 74
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G ++ +M +QH A L+ V+L G LL++A+ I G+HP
Sbjct: 74 DGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIK 133
Query: 415 ITEGFDIARNKSLEVLESM--KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAV 588
I +GFD+A K+LE L+S+ K P+E RE LV+ A+TSL +K+ + VDAV
Sbjct: 134 IADGFDLACKKALETLDSISDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAV 192
Query: 589 LTIR-TPGKPVDLHMVEI 639
L++ K V+ M+++
Sbjct: 193 LSVADIESKDVNFEMIKM 210
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSGAGDIKITKE 236
+ +L P+G KMLVS GD+ IT +
Sbjct: 50 RTSLGPRGLDKMLVSPDGDVTITND 74
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G ++ +M +QH A L+ V+L G LL++A+ I G+HP
Sbjct: 74 DGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIK 133
Query: 415 ITEGFDIARNKSLEVLESM--KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAV 588
I +GFD+A K+LE L+S+ K P+E RE LV+ A+TSL +K+ + VDAV
Sbjct: 134 IADGFDLACKKALETLDSISDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAV 192
Query: 589 LTIR-TPGKPVDLHMVEI 639
L++ K V+ M+++
Sbjct: 193 LSVADIESKDVNFEMIKM 210
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSGAGDIKITKE 236
+ +L P+G KMLVS GD+ IT +
Sbjct: 50 RTSLGPRGLDKMLVSPDGDVTITND 74
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 64.9 bits (151), Expect = 5e-11
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L++M + HPTA ++ V++ G LL A +S+G+HP
Sbjct: 72 DGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTT 131
Query: 415 ITEGFDIARNKSLEVLESMKIPIEIARENLVD-VARTSLKTKVHPSLADVLTDACVDAVL 591
I+E F A ++ ++L+ M P++++ + L++ +A TSL +KV + +L V+AV
Sbjct: 132 ISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVK 191
Query: 592 TI--RTPGKPVDLHMVEIME 645
I V+L M++I++
Sbjct: 192 KIINSENDSNVNLKMIKIIK 211
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSGAGDIKITKE 236
+ +L P+G KM+ SG GD+ IT +
Sbjct: 48 RTSLGPRGMDKMIQSGNGDVTITND 72
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 64.9 bits (151), Expect = 5e-11
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L++M + HPTA ++ V++ G LL A +S+G+HP
Sbjct: 72 DGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTT 131
Query: 415 ITEGFDIARNKSLEVLESMKIPIEIARENLVD-VARTSLKTKVHPSLADVLTDACVDAVL 591
I+E F A ++ ++L+ M P++++ + L++ +A TSL +KV + +L V+AV
Sbjct: 132 ISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVK 191
Query: 592 TI--RTPGKPVDLHMVEIME 645
I V+L M++I++
Sbjct: 192 KIINSENDSNVNLKMIKIIK 211
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSGAGDIKITKE 236
+ +L P+G KM+ SG GD+ IT +
Sbjct: 48 RTSLGPRGMDKMIQSGNGDVTITND 72
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L +++++HP ++ V++ ELLK+AD + + +HP
Sbjct: 61 DGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTT 120
Query: 415 ITEGFDIARNKSLE-VLESMKIPIE-IARENLVDVARTSLKTKVHPSLADVLTDACVDAV 588
I G+ +A ++++ + E++ + I R+++V+ A+TS+ +K+ AD + VDA
Sbjct: 121 IINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAA 180
Query: 589 LTIR 600
+R
Sbjct: 181 EAVR 184
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L +++++HP ++ V++ ELLK+AD + + +HP
Sbjct: 61 DGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTT 120
Query: 415 ITEGFDIARNKSLE-VLESMKIPIE-IARENLVDVARTSLKTKVHPSLADVLTDACVDAV 588
I G+ +A ++++ + E++ + I R+++V+ A+TS+ +K+ AD + VDA
Sbjct: 121 IINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAA 180
Query: 589 LTIR 600
+R
Sbjct: 181 EAVR 184
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L + + +P A ++ +L ELLK+A+ +++ +HP+
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 415 ITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKVHPSLADVLTDACVDAVL 591
I G+ A + E L+ I + R++L+ +ART+L +K+ + VDAVL
Sbjct: 123 IISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVL 182
Query: 592 TIRTPG 609
++ G
Sbjct: 183 RLKGSG 188
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSG----AGDIKITKEWQCFVT*DA--NPAPYSLTDCS 296
K TL PKG K+L+SG AG IK+T + + NPA L D S
Sbjct: 35 KSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMS 85
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L + + +P A ++ +L ELLK+A+ +++ +HP+
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 415 ITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKVHPSLADVLTDACVDAVL 591
I G+ A + E L+ I + R++L+ +ART+L +K+ + VDAVL
Sbjct: 123 IISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVL 182
Query: 592 TIRTPG 609
++ G
Sbjct: 183 RLKGSG 188
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSG----AGDIKITKEWQCFVT*DA--NPAPYSLTDCS 296
K TL PKG K+L+SG AG IK+T + + NPA L D S
Sbjct: 35 KSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMS 85
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L + + +P A ++ +L ELLK+A+ +++ +HP+
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 415 ITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKVHPSLADVLTDACVDAVL 591
I G+ A + E L+ I + R++L+ +ART+L +K+ + VDAVL
Sbjct: 123 IISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVL 182
Query: 592 TIRTPG 609
++ G
Sbjct: 183 RLKGSG 188
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 162 KLTLXPKGTMKMLVSG----AGDIKITKEWQCFVT*DA--NPAPYSLTDCS 296
K TL PKG K+L+SG AG IK+T + + NPA L D S
Sbjct: 35 KSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMS 85
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 48.4 bits (110), Expect = 4e-06
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L + I P AS + V+L E+LKQ FI +G+HP++
Sbjct: 61 DGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQL 120
Query: 415 ITEGFDIARNKSLEVLESMKIPIE---IARENLVDVARTSLKTKVHPSLADVLTDACVDA 585
+ A K+L+ L ++I I RE LV A T+L +K+ + VDA
Sbjct: 121 LIRAIGKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
Query: 586 VLTI 597
V T+
Sbjct: 181 VNTL 184
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 48.4 bits (110), Expect = 4e-06
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+G +L + I P AS + V+L E+LKQ FI +G+HP++
Sbjct: 61 DGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQL 120
Query: 415 ITEGFDIARNKSLEVLESMKIPIE---IARENLVDVARTSLKTKVHPSLADVLTDACVDA 585
+ A K+L+ L ++I I RE LV A T+L +K+ + VDA
Sbjct: 121 LIRAIGKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
Query: 586 VLTI 597
V T+
Sbjct: 181 VNTL 184
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 235 NGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRI 414
+GN +L E+ ++HP A + ++L GE++ A ++ + HP +
Sbjct: 64 DGNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTL 123
Query: 415 ITEGFDIARNKSLEVLES-MKIPIEIARE-NLVDVARTSLKTKVHPSLADVLTDACVDAV 588
I + + A ++ E+ ++I + + V ++ L TK+ D+ + + AV
Sbjct: 124 IIKAYRQALEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAV 183
Query: 589 LTIR 600
TIR
Sbjct: 184 KTIR 187
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 500 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 348
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 500 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 348
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.9 bits (59), Expect = 6.6
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +2
Query: 23 R*LIETENVLNEMAAISL---LNPKAEFARAAQALAVNISAAKGIQDVMKTNLGS--ERH 187
R L+++ N MA + L + PKA+ ++ A+AL + + Q V+ TN+ + ER+
Sbjct: 248 RPLLQSRNCSVVMAVVQLFYHVAPKAQLSQIARALVRLLRGPRETQYVVLTNIATICERN 307
Query: 188 DENVGFWCWGHKDHQGMAMFCYMR-CKSSTLQPH*LLERQPLKMMPLEMVQHLLSSSLES 364
G + ++R C SS ++ L+ L + E H++ L++
Sbjct: 308 PVEEGTYAISKTMFDPFLKSFFVRSCDSSLVKK---LKLHVLTSLVSEANVHIILRELQT 364
Query: 365 YLNRPTYSS 391
Y++ +S
Sbjct: 365 YVHMSDLAS 373
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +2
Query: 74 LLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGSERHDENVGFWCWGHKDHQGMAMFC 250
LL+P R LAV + + DV T R D+ + W H + + C
Sbjct: 1312 LLDPPHAMGRDWSILAVKLQLTDQVPDVDSTGQSLSRTDQLLNEWAIHHPEQASVGNLC 1370
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +2
Query: 74 LLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGSERHDENVGFWCWGHKDHQGMAMFC 250
LL+P R LAV + + DV T R D+ + W H + + C
Sbjct: 1312 LLDPPHAMGRDWSILAVKLQLTDQVPDVDSTGQSLSRTDQLLNEWAIHHPEQASVGNLC 1370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,600,303
Number of Sequences: 27780
Number of extensions: 254510
Number of successful extensions: 597
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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