Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_I22
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431... 33 0.20
12_01_1005 - 10182297-10182482,10183904-10184044 31 1.1
12_01_0724 - 6377023-6379392 31 1.1
09_02_0282 - 6795269-6795564,6795682-6795761,6795873-6795926,679... 31 1.1
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 30 1.4
02_03_0116 - 15440263-15441024,15441097-15443451 30 1.9
06_02_0225 + 13257655-13260693 29 2.4
01_05_0513 - 22864657-22867899 29 2.4
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 29 3.2
01_07_0099 - 41076056-41076059,41076135-41076175,41076937-410770... 29 4.3
02_05_0442 - 29044736-29046604 28 5.6
02_03_0347 - 17999780-18000592,18000656-18003019 28 5.6
12_02_0626 - 21344530-21344986,21346132-21346469,21347300-213473... 28 7.5
04_01_0034 - 401208-402923 28 7.5
11_06_0563 - 25018219-25018658,25020381-25020459 27 9.9
11_01_0182 + 1437110-1438984 27 9.9
06_02_0064 + 11062798-11063568,11064212-11064261,11064354-110645... 27 9.9
01_05_0463 + 22461169-22461216,22463153-22463248,22463334-224634... 27 9.9
>09_06_0132 -
21042653-21042873,21042950-21043027,21043106-21043167,
21043504-21043578,21043664-21043752,21043825-21043905,
21044939-21045076,21046299-21046429,21046521-21046592,
21047218-21047275,21047362-21047461,21047544-21047617,
21047701-21047836,21047913-21048137,21048211-21048446,
21048949-21049081,21049195-21049484
Length = 732
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 175 VHPHPSVVP---GLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAA 345
V+P PS VP GL P G+ PNG + G RYQ KP + P+ E
Sbjct: 453 VNPSPSAVPSKPGLGPSSYTPEAAKGALPNGTQLRRGGMDRYQRVEKPR--EEAPIKENE 510
Query: 346 KRV 354
R+
Sbjct: 511 IRI 513
>12_01_1005 - 10182297-10182482,10183904-10184044
Length = 108
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 150 CGKNGREYGPPASICGPGFTTRCYPWN 230
CGK+GR + CG GFT C W+
Sbjct: 17 CGKDGRNHWREDVGCGLGFTFACVDWS 43
>12_01_0724 - 6377023-6379392
Length = 789
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 217 VIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKRVMREMESLP 378
V H ++ SG +GE PRRR T P P+ + L +EA + V R S P
Sbjct: 6 VAHNLSPSASGDDGEQ---NPRRRASTPPSPSR-RSLGREEALEGVERSATSPP 55
>09_02_0282 -
6795269-6795564,6795682-6795761,6795873-6795926,
6796003-6796081,6796893-6796952,6798152-6798161
Length = 192
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 321 LQVIRFGSGLIAASWTVRNVFTVRSTAVHCHSMDNTGW*TRDHRWMRVDRIPFH 160
L+V G G ++ +N+ VR+ H + DN GW T +H W V+ +H
Sbjct: 27 LKVSLSGIGCTIPTFAGKNI--VRARLYHSSTRDNVGWET-NHSWFMVNDRAYH 77
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 217 VIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKRVMREMESLPT 381
V H ++ SG + E PRRR +T P P+ + L +EA + V R S PT
Sbjct: 6 VAHNLSPSASGDDSEQ---NPRRRARTPPPPSR-RSLRREEALEGVERSATSPPT 56
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 223 HGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKRVMREMESLPT 381
H ++ SG + E PRRR +T P P+ + L +EA + V R + S PT
Sbjct: 8 HNLSPSASGDDSEQ---NPRRRARTPPPPSR-RSLRREEALEGVERSVTSPPT 56
>06_02_0225 + 13257655-13260693
Length = 1012
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 148 AVGKMEGNTVHPHPSVVPGLPPGVI 222
AV + +G + HPSV+ G PPG +
Sbjct: 650 AVAEYQGRPLQDHPSVLNGRPPGAL 674
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 142 TTAVGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIP---HGP 279
T A +++ VHP +V PP + H M GP+G +P HGP
Sbjct: 200 TEAAVEVQQPPVHPPVIIVEEAPPPMHHPMMPPMHGPHGPMMPPAVHGP 248
>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 222 PWNDSARQWTER*TH 266
PW+DS+++WTER H
Sbjct: 1893 PWSDSSQEWTERMKH 1907
>01_07_0099 -
41076056-41076059,41076135-41076175,41076937-41077041,
41077476-41077552,41078773-41078944,41079099-41079194,
41080268-41080465
Length = 230
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -3
Query: 504 SHSYSVPESGFMYHAFYLD*FIFRNSSTTCQQLLQN 397
++ +++ ++ F ++FYLD +F SS+T LLQ+
Sbjct: 186 AYQHTIADATFKNYSFYLDVNLFSRSSSTAGFLLQS 221
>02_05_0442 - 29044736-29046604
Length = 622
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 193 VVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRY 291
VV G P + G +GPN +H+P GP +
Sbjct: 151 VVRGAIPRCLAGGAYIRNGPNPQHLPRGPHHLF 183
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 217 VIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKRVMREMESLPT 381
V H ++ SG + E PRRR +T P P + L +EA + + R S PT
Sbjct: 6 VAHNLSPSASGDDREQ---NPRRRARTPPSPFR-RSLGREEALEGIERSATSSPT 56
>12_02_0626 -
21344530-21344986,21346132-21346469,21347300-21347338,
21347572-21347629,21349854-21350136,21350404-21350766,
21350768-21350840
Length = 536
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -1
Query: 485 RKVGSCIMPSIWTSSYLGTVPRRANSSCKTETGVFVGSDSISRITLLA 342
R V +C++ S+ T +GTV R NSSC G+ + S+ ++ L+
Sbjct: 243 RNVPNCLLVSLPTQ--VGTVKRAHNSSCSPMEGIPILHISVVDLSALS 288
>04_01_0034 - 401208-402923
Length = 571
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +1
Query: 148 AVGKMEGNTVHPHPSV-VPGLPPGVIHGMTVHGS-GPNGEHIPHGPRRRYQTRPKP 309
A+GK + VH H PP P E PH PR Q RP P
Sbjct: 252 AIGKENASPVHHHHHCGKENAPPAAKQAAAAPPMRAPLAEQQPHAPRLPLQPRPAP 307
>11_06_0563 - 25018219-25018658,25020381-25020459
Length = 172
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 226 GMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKRVMRE 363
G+ + GSG NG +RR +RP P +P AK RE
Sbjct: 105 GLVLPGSGSNGPRPTRIRQRRASSRPDPAAAGLVPPGYGAKSGRRE 150
>11_01_0182 + 1437110-1438984
Length = 624
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -1
Query: 560 AAECFASFFERPVPIATKSATVTLYRKVGSC-----IMPSIWTSSYLGTVPRRANSSCKT 396
AA+ F R + +A K +TL +G+C + +W +Y V RR +C
Sbjct: 232 AADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTY--AVKRRLAVNCIV 289
Query: 395 ETGV 384
T +
Sbjct: 290 ATAL 293
>06_02_0064 +
11062798-11063568,11064212-11064261,11064354-11064510,
11064598-11064816,11065301-11065429,11066502-11068031,
11068654-11069013,11069086-11069205,11069727-11069897,
11070022-11070180,11070327-11070452,11070660-11070968
Length = 1366
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 217 HRVVNPGPQMDAGGPYSLP 161
H VV P P GGPYS P
Sbjct: 58 HGVVVPPPMTSGGGPYSYP 76
>01_05_0463 +
22461169-22461216,22463153-22463248,22463334-22463446,
22463479-22463494,22463939-22464031,22464118-22464261,
22464508-22464596,22464687-22464792,22464874-22464961,
22465585-22465703,22465788-22465952,22466235-22466404,
22466488-22466597,22466682-22466791,22466886-22466996,
22467082-22467183,22467266-22467471,22467563-22467881,
22467983-22468093
Length = 771
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 441 IFRNSSTTCQQLLQNRDR-SLCRK*FHFPHYPL 346
+FR+S+ C L+N+D+ S R F+ HY L
Sbjct: 307 VFRSSTGACAAFLENKDKVSYARVAFNGMHYDL 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,724
Number of Sequences: 37544
Number of extensions: 494493
Number of successful extensions: 1379
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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