Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_I22
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08998-1|AAB50581.2| 366|Homo sapiens TAR RNA binding protein 2... 58 4e-08
M60801-1|AAA36765.1| 345|Homo sapiens TAR RNA binding protein p... 58 4e-08
BT007140-1|AAP35804.1| 366|Homo sapiens TAR (HIV) RNA binding p... 58 4e-08
BC005860-1|AAH05860.1| 366|Homo sapiens Tar (HIV-1) RNA binding... 58 4e-08
AF281068-2|AAL55730.1| 53|Homo sapiens TAR RNA-binding protein... 54 4e-07
AF281068-1|AAL55731.1| 74|Homo sapiens TAR RNA-binding protein... 54 4e-07
CR533525-1|CAG38556.1| 313|Homo sapiens PRKRA protein. 49 1e-05
BT007243-1|AAP35907.1| 313|Homo sapiens protein kinase, interfe... 49 1e-05
BC009470-1|AAH09470.1| 313|Homo sapiens protein kinase, interfe... 49 1e-05
AK223107-1|BAD96827.1| 313|Homo sapiens protein kinase, interfe... 49 1e-05
AF083033-1|AAD33099.1| 313|Homo sapiens PKR-associating protein... 49 1e-05
AF072860-1|AAC25672.1| 313|Homo sapiens protein activator of th... 49 1e-05
AC009948-2|AAX88882.1| 313|Homo sapiens unknown protein. 49 1e-05
X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase... 35 0.22
X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase... 35 0.22
X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein. 35 0.22
X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein. 35 0.22
U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase p... 35 0.22
U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase p... 35 0.22
U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase p... 35 0.22
U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein. 35 0.22
U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA adeno... 35 0.22
BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein pr... 35 0.22
BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein pr... 35 0.22
BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase, RN... 35 0.22
AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase, RN... 35 0.22
AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase, RN... 35 0.22
AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase, RN... 35 0.22
AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase, RN... 35 0.22
AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase, RN... 35 0.22
AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase, RN... 35 0.22
AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase, RN... 35 0.22
BC017732-1|AAH17732.1| 672|Homo sapiens spermatid perinuclear R... 32 2.1
BC002693-1|AAH02693.2| 615|Homo sapiens STRBP protein protein. 32 2.1
AL365338-5|CAH70300.1| 672|Homo sapiens spermatid perinuclear R... 32 2.1
AL365338-4|CAH70299.1| 658|Homo sapiens spermatid perinuclear R... 32 2.1
AK027890-1|BAB55434.1| 672|Homo sapiens protein ( Homo sapiens ... 32 2.1
AK024285-1|BAB14873.1| 405|Homo sapiens protein ( Homo sapiens ... 32 2.1
AK002169-1|BAA92120.1| 490|Homo sapiens spermatid perinuclear R... 32 2.1
AF333337-1|AAK20832.1| 673|Homo sapiens spermatid perinuclear R... 32 2.1
U10324-1|AAA20994.1| 671|Homo sapiens NF90 protein protein. 31 3.6
BC064836-1|AAH64836.1| 706|Homo sapiens ILF3 protein protein. 31 3.6
AJ271744-1|CAC01404.1| 564|Homo sapiens DRBP76 alpha protein. 31 3.6
AJ271741-1|CAC01121.1| 245|Homo sapiens drbp76 alpha protein. 31 3.6
AK026153-1|BAB15377.1| 347|Homo sapiens protein ( Homo sapiens ... 30 8.3
>U08998-1|AAB50581.2| 366|Homo sapiens TAR RNA binding protein 2
protein.
Length = 366
Score = 57.6 bits (133), Expect = 4e-08
Identities = 28/73 (38%), Positives = 36/73 (49%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXX 555
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D G G
Sbjct: 27 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHK 86
Query: 556 XXXXLLDKLTGAT 594
L L G +
Sbjct: 87 AAEVALKHLKGGS 99
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 388 PVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
PV LQEL+ ++G +P+Y + Q G H F V + +G+G
Sbjct: 160 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSG 207
>M60801-1|AAA36765.1| 345|Homo sapiens TAR RNA binding protein
protein.
Length = 345
Score = 57.6 bits (133), Expect = 4e-08
Identities = 28/73 (38%), Positives = 36/73 (49%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXX 555
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D G G
Sbjct: 6 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHK 65
Query: 556 XXXXLLDKLTGAT 594
L L G +
Sbjct: 66 AAEVALKHLKGGS 78
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 388 PVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
PV LQEL+ ++G +P+Y + Q G H F V + +G+G
Sbjct: 139 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSG 186
>BT007140-1|AAP35804.1| 366|Homo sapiens TAR (HIV) RNA binding
protein 2 protein.
Length = 366
Score = 57.6 bits (133), Expect = 4e-08
Identities = 28/73 (38%), Positives = 36/73 (49%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXX 555
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D G G
Sbjct: 27 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHK 86
Query: 556 XXXXLLDKLTGAT 594
L L G +
Sbjct: 87 AAEVALKHLKGGS 99
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 388 PVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
PV LQEL+ ++G +P+Y + Q G H F V + +G+G
Sbjct: 160 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSG 207
>BC005860-1|AAH05860.1| 366|Homo sapiens Tar (HIV-1) RNA binding
protein 2 protein.
Length = 366
Score = 57.6 bits (133), Expect = 4e-08
Identities = 28/73 (38%), Positives = 36/73 (49%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXX 555
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D G G
Sbjct: 27 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHK 86
Query: 556 XXXXLLDKLTGAT 594
L L G +
Sbjct: 87 AAEVALKHLKGGS 99
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 388 PVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
PV LQEL+ ++G +P+Y + Q G H F V + +G+G
Sbjct: 160 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSG 207
>AF281068-2|AAL55730.1| 53|Homo sapiens TAR RNA-binding protein
TRBP1 protein.
Length = 53
Score = 54.0 bits (124), Expect = 4e-07
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVAD 507
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D
Sbjct: 6 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGD 49
>AF281068-1|AAL55731.1| 74|Homo sapiens TAR RNA-binding protein
TRBP2 protein.
Length = 74
Score = 54.0 bits (124), Expect = 4e-07
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVAD 507
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D
Sbjct: 27 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGD 70
>CR533525-1|CAG38556.1| 313|Homo sapiens PRKRA protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>BT007243-1|AAP35907.1| 313|Homo sapiens protein kinase,
interferon-inducible double stranded RNA dependent
activator protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>BC009470-1|AAH09470.1| 313|Homo sapiens protein kinase,
interferon-inducible double stranded RNA dependent
activator protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>AK223107-1|BAD96827.1| 313|Homo sapiens protein kinase,
interferon-inducible double stranded RNA dependent
activator va protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>AF083033-1|AAD33099.1| 313|Homo sapiens PKR-associating protein
RAX protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>AF072860-1|AAC25672.1| 313|Homo sapiens protein activator of the
interferon-induced protein kinase protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>AC009948-2|AAX88882.1| 313|Homo sapiens unknown protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 376 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 528
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEG 81
>X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 931
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 318 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 357
>X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 1221
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 608 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 647
>X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein.
Length = 931
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 318 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 357
>U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase
protein.
Length = 1181
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase
protein.
Length = 1200
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase
protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA
adenosine deaminase protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein
protein.
Length = 1278
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 644 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 683
>BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein
protein.
Length = 1257
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 644 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 683
>BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 318 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 357
>AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 318 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 357
>AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 318 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 357
>AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase,
RNA-specific isoform ADAR-a variant protein.
Length = 1244
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 631 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 670
>BC017732-1|AAH17732.1| 672|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 672
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 512 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 567
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 568 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 598
>BC002693-1|AAH02693.2| 615|Homo sapiens STRBP protein protein.
Length = 615
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 455 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 510
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 511 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 541
>AL365338-5|CAH70300.1| 672|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 672
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 512 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 567
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 568 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 598
>AL365338-4|CAH70299.1| 658|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 658
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 498 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 553
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 554 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 584
>AK027890-1|BAB55434.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ14984 fis, clone Y79AA1000349, highly similar to
M.musculus Spnr mRNA for RNA binding protein. ).
Length = 672
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 512 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 567
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 568 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 598
>AK024285-1|BAB14873.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ14223 fis, clone NT2RP3004013, highly similar to
M.musculus Spnr mRNA for RNA binding protein. ).
Length = 405
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 245 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 300
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 301 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 331
>AK002169-1|BAA92120.1| 490|Homo sapiens spermatid perinuclear
RNA-binding protein. protein.
Length = 490
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 330 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 385
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 386 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 416
>AF333337-1|AAK20832.1| 673|Homo sapiens spermatid perinuclear
RNA-binding protein protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 561
K PV L E RRG KYEL+ G H+ F V V G G
Sbjct: 513 KNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 568
Query: 562 XXLLDKL-TGATPADQTTNGNVPETGAVVPT 651
L+KL +G A+ +P+ VV T
Sbjct: 569 LAALEKLFSGPNAANNKKKKIIPQAKGVVNT 599
>U10324-1|AAA20994.1| 671|Homo sapiens NF90 protein protein.
Length = 671
Score = 31.1 bits (67), Expect = 3.6
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +1
Query: 328 PLDEAAKRVMREMESLPT--KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
P D A+ V ++ L K PV L E RRG KYEL+ G H+ F V V
Sbjct: 511 PSDATAENVKQQGPILTKHGKNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEV 566
Query: 502 ADLVAMGTGRXXXXXXXXXXXXLLDKLTGATP 597
G G L+KL TP
Sbjct: 567 DGQKFQGAGSNKKVAKAYAALAALEKLFPDTP 598
>BC064836-1|AAH64836.1| 706|Homo sapiens ILF3 protein protein.
Length = 706
Score = 31.1 bits (67), Expect = 3.6
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +1
Query: 328 PLDEAAKRVMREMESLPT--KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
P D A+ V ++ L K PV L E RRG KYEL+ G H+ F V V
Sbjct: 510 PSDATAENVKQQGPILTKHGKNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEV 565
Query: 502 ADLVAMGTGRXXXXXXXXXXXXLLDKLTGATP 597
G G L+KL TP
Sbjct: 566 DGQKFQGAGSNKKVAKAYAALAALEKLFPDTP 597
>AJ271744-1|CAC01404.1| 564|Homo sapiens DRBP76 alpha protein.
Length = 564
Score = 31.1 bits (67), Expect = 3.6
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +1
Query: 328 PLDEAAKRVMREMESLPT--KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
P D A+ V ++ L K PV L E RRG KYEL+ G H+ F V V
Sbjct: 376 PSDATAENVKQQGPILTKHGKNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEV 431
Query: 502 ADLVAMGTGRXXXXXXXXXXXXLLDKLTGATP 597
G G L+KL TP
Sbjct: 432 DGQKFQGAGSNKKVAKAYAALAALEKLFPDTP 463
>AJ271741-1|CAC01121.1| 245|Homo sapiens drbp76 alpha protein.
Length = 245
Score = 31.1 bits (67), Expect = 3.6
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +1
Query: 328 PLDEAAKRVMREMESLPT--KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 501
P D A+ V ++ L K PV L E RRG KYEL+ G H+ F V V
Sbjct: 57 PSDATAENVKQQGPILTKHGKNPVMELNE--KRRGL--KYELISETGGSHDKRFVMEVEV 112
Query: 502 ADLVAMGTGRXXXXXXXXXXXXLLDKLTGATP 597
G G L+KL TP
Sbjct: 113 DGQKFQGAGSNKKVAKAYAALAALEKLFPDTP 144
>AK026153-1|BAB15377.1| 347|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22500 fis, clone HRC11301. ).
Length = 347
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +1
Query: 172 TVHPHPSVVPGL---PPGVIHGMTVHGSGPNG-EHIPHGPRRRYQTRPKPNNLQ 321
T PHP+ +PG P + G + + P H+P YQ RP P+ +Q
Sbjct: 70 TSQPHPAPLPGACTHPAAGLAGQGLCATSPTQLSHLPEEHPVTYQNRPHPSFMQ 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,965,219
Number of Sequences: 237096
Number of extensions: 2807571
Number of successful extensions: 10789
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 10083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10789
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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