Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_I22
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.84 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   1.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.4  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   4.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 211 PGVIHGMT-VHGSGPNGEHIPHGPRR 285
           PG++ G+  V G G  G ++P+G +R
Sbjct: 875 PGLLQGVQQVFGQGVQGMNVPYGMQR 900


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 476 GSCIMPSIWTSSYLGTVPRRANSSCKTETGV 384
           G C+     T   L T      S CKTETG+
Sbjct: 9   GFCVCVGALTIEELKTRLHTEQSVCKTETGI 39


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 185 CGWTVFPSIFPTAVVTNVFIEICY*K*NGYNTKDKRE 75
           C   VF S+   AVV N    +      GY+ +D RE
Sbjct: 283 CSVFVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLRE 319


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = +1

Query: 151 VGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLP 330
           V     N+VH H     GL  G  H         N EH P GP+      P P   ++ P
Sbjct: 37  VSNSASNSVHGHRE---GL--GRRHRYNFQLKPYNPEHKPPGPKDLVYLEPSPPFCEKNP 91


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = +1

Query: 151 VGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLP 330
           V     N+VH H     GL  G  H         N EH P GP+      P P   ++ P
Sbjct: 38  VSNSASNSVHGHRE---GL--GRRHRYNFQLKPYNPEHKPPGPKDLVYLEPSPPFCEKNP 92


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 153 HSRSYKCIYRNLLLKMKRIQ 94
           H+ +Y C+ RNL  ++   Q
Sbjct: 679 HNGNYSCVARNLAAEVSHTQ 698


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 525 WSLKKRGKALCSQGFTGQV 581
           W + KRGK + S  + G V
Sbjct: 147 WDVDKRGKIMLSFAWIGSV 165


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 434 GTVPRRANSSCKTETGVFVGSDSISRITLLAASSKGNL 321
           GTVP   +S+C+     F+  +S   I  ++ S+ G L
Sbjct: 632 GTVPDETHSACRDIPEEFLRPESGWAIGAMSFSATGIL 669


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,484
Number of Sequences: 438
Number of extensions: 4644
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)