Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_I21
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1341 - 32768785-32768847,32770469-32770582,32770809-327708... 45 5e-05
04_01_0102 + 1060539-1060657,1060752-1060904,1061478-1061728,106... 43 2e-04
04_01_0101 + 1041755-1041864,1041950-1042102,1042174-1042424,104... 42 6e-04
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 37 0.012
11_01_0441 - 3363069-3363137,3363273-3363430,3363549-3363613,336... 36 0.021
12_02_0872 + 23884715-23885770 32 0.46
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 31 0.61
11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076... 31 0.80
02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113 30 1.4
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 29 2.4
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 29 3.2
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 5.6
03_02_0173 + 6138406-6138628,6139769-6139857,6139922-6140608,614... 28 7.5
02_05_0948 - 33003921-33006269 28 7.5
12_01_0861 + 8153108-8153266,8154633-8155136 27 9.9
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 27 9.9
>04_04_1341 -
32768785-32768847,32770469-32770582,32770809-32770858,
32770940-32771033,32771144-32771221,32771397-32771472,
32771557-32771651,32771748-32771927,32772491-32772802,
32773122-32773670
Length = 536
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +1
Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMFSLGFIAKHVEDLAPLTK 435
GSD GGS R PA +CG+ G PT G + G+ S+ +G V D A +
Sbjct: 216 GSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLM---AYASSLDVVGCFGSSVVDTATILS 272
Query: 436 IVAG-DKAKELNLDKDV-DIKN--IKFNYLES 519
++AG DK + DV D K+ + + LES
Sbjct: 273 VIAGHDKMDSTSSSHDVSDYKSELVPLDLLES 304
>04_01_0102 +
1060539-1060657,1060752-1060904,1061478-1061728,
1061959-1062141,1062248-1062395,1062679-1062850,
1062971-1063105,1063210-1063356
Length = 435
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMF-SLGFIAKHVEDLAPLT 432
G+D GGS R+PA YCG+FG P+ G + V MF ++G+ ++ + L+ +T
Sbjct: 133 GTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVI----PMAQMFDTVGWFSRDLSTLSRVT 188
Query: 433 KIV 441
K++
Sbjct: 189 KVL 191
>04_01_0101 +
1041755-1041864,1041950-1042102,1042174-1042424,
1042878-1043060,1043163-1043310,1043787-1043958,
1057226-1057366,1057478-1057624
Length = 434
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMF-SLGFIAKHVEDLAPLT 432
G+D GGS R+PA YCG+FG + G + + V MF ++G+ A+ + L+ +T
Sbjct: 130 GTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVI----PMAQMFDTVGWFARDLSTLSRVT 185
Query: 433 KIV 441
K++
Sbjct: 186 KVL 188
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +1
Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMFSLGFIAKHVEDLAPLTK 435
G+D GGS R+P+ CG+ G T G T++ G G E L A VED +
Sbjct: 293 GTDGGGSVRIPSSLCGIIGLKTTYGRTDMTGALCDCGTVEVASPL---AASVEDALLVYS 349
Query: 436 IVAGDK 453
+AG +
Sbjct: 350 AIAGSR 355
>11_01_0441 -
3363069-3363137,3363273-3363430,3363549-3363613,
3363709-3363777,3363881-3363973,3364081-3364184,
3364327-3364410,3364486-3364693,3364809-3364880,
3365005-3365080,3365788-3365900,3366006-3366153,
3366996-3367073,3367968-3368097,3368296-3368486,
3368644-3368704,3368847-3368956,3369090-3369312
Length = 683
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMFSLGFIAKHVED 417
G+D GGS RMPA CG+ G PT G + G+ N ++ G +A VED
Sbjct: 347 GADGGGSVRMPAALCGVVGLKPTAGRFSKDGLLPLNW---TVGMPGILAATVED 397
>12_02_0872 + 23884715-23885770
Length = 351
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 253 KGSDLGGSTRMPAFYCG-MFGHHPTPGSTNLRGVFFRNGDEESMFSLGFIAKHVEDLAPL 429
+G + +TR+P CG + G +P +T+L G F ++FSL F+A + DL L
Sbjct: 137 RGRGVARATRLPP--CGSVAGAYPAMVATHLFGAFVMLSANAAVFSLMFLAFNGADLLGL 194
Query: 430 T 432
T
Sbjct: 195 T 195
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 370 EESMFSLGFIAKHVEDLAPLTKIVAGDKAKELNL--DKDVDIKNIKFNYLESTNDVCVSS 543
+ESM KHV+ + + +GD++ E ++ K VD N K +YLE NDV +
Sbjct: 540 DESMEEDVMETKHVDSNTKVEHVSSGDESMEEDVMETKHVD-SNTKPDYLEGKNDVTLEH 598
Query: 544 VRAEL 558
V E+
Sbjct: 599 VVKEV 603
>11_05_0078 -
18906900-18907082,18907104-18907337,18907429-18907653,
18907739-18907909,18907994-18908109,18908215-18908369,
18908450-18908573,18909007-18909107,18909215-18909297,
18909383-18909607,18909694-18909810,18910488-18910640
Length = 628
Score = 31.1 bits (67), Expect = 0.80
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +1
Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMFSLGFIAKHVEDLAPLTK 435
GS+ GS PA CG+ T G+ GV ES+ LG + D A +
Sbjct: 320 GSETAGSITYPAARCGVTALRTTFGTVARTGVM---SISESLDKLGPFCRSAIDCAVVLD 376
Query: 436 IV----AGD-KAKELNLDK--DVDIKNIKFNYLES 519
+ AGD ++E+ ++ VDI+ + YL+S
Sbjct: 377 AIRGKDAGDPSSREVAIEDPFHVDIRQLTVGYLDS 411
>02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113
Length = 728
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 418 LAPLTKIVAGDKAKELNLDKDVDIKNIKFNYLESTNDVC--VSSVRAELKGAMKRAI-SK 588
+AP I+A + DVD + +KFN L T+ C VS V A K A I +
Sbjct: 496 VAPGVSILAAWSGLVSPTELDVDTRRVKFNILSGTSAACPHVSGVAALRKMARPSWIPAM 555
Query: 589 ITQELTTADAPQP 627
I LTT P
Sbjct: 556 IMSALTTTAGLDP 568
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 476 LSRFSSFALSPATILVNGAKSSTCLAIKPRENIDSSSPLRKNTPRKLV 333
++R ++ +L P LV G+K TC+ K +S R P +LV
Sbjct: 162 MTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELV 209
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = -2
Query: 464 SSFALSPATILVNGAKSSTCLAIKPRENIDSSSPLRKNTPRKLVLPGVGWCPNMPQ*NAG 285
++F +SP + V G AI ++ +S P R+N VL V + N+
Sbjct: 237 NNFGMSPLYLAVVGRSIGAVKAIVQWKHASASGPKRQNALHAAVLQSVEITRELLSWNSN 296
Query: 284 IRVDPPKSE 258
+ +P +SE
Sbjct: 297 LAKEPDESE 305
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 439 VAGDKAKELNLDKDVDIKNIKFNYLE 516
V G K+LNL KD +IK ++ YL+
Sbjct: 889 VRGGAVKKLNLPKDNNIKTLRLRYLK 914
>03_02_0173 +
6138406-6138628,6139769-6139857,6139922-6140608,
6140682-6140834,6140922-6141290
Length = 506
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 481 VDIKNIKFNYLESTNDVCVSSVRAELKGAMKRAIS 585
+D I+F +S+ DVC+ S R +KGA K ++
Sbjct: 445 LDTTRIEFRCSDSSVDVCLPSDRDAIKGAHKALLA 479
>02_05_0948 - 33003921-33006269
Length = 782
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 418 LAPLTKIVAGDKAKELNLDKDVDIKNIKFNYLESTNDVC--VSSVRAELKGA 567
+AP I+A + D D+D + ++FN + T+ C VS + A L+ A
Sbjct: 519 IAPGVNILAAWTGESAPTDLDIDPRRVEFNIISGTSMSCPHVSGLAALLRQA 570
>12_01_0861 + 8153108-8153266,8154633-8155136
Length = 220
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -2
Query: 452 LSPATILVNGAKS--STCLAIKPRENIDSSSP--LRKNTPRKLVLPGVGWCPNMPQ*NAG 285
+ P ++ GA S+ L PR + S SP + PR V G+ P P +
Sbjct: 72 MEPVSMTEKGAHHPPSSQLRAAPRSLLSSPSPHCQEGHDPRLCVSAGLVAIPRCPPPTSS 131
Query: 284 IRVDPPKSEPFISI 243
+DPP+S +++
Sbjct: 132 PSLDPPESSTTVAL 145
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 249 QHPVILNILLFPLCGKCLQLTPKFQNVF 166
+HP I+ P CG C QL P+ + F
Sbjct: 48 KHPFIVVKFYAPWCGHCKQLAPEVTDYF 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,432,599
Number of Sequences: 37544
Number of extensions: 363909
Number of successful extensions: 924
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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