Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_I21
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-16|CAB61089.1|  535|Caenorhabditis elegans Hypothetical...    78   5e-15
AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical ...    39   0.004
AL132860-4|CAB60496.1|  762|Caenorhabditis elegans Hypothetical ...    37   0.014
AF045643-6|AAC02593.2|  570|Caenorhabditis elegans Hypothetical ...    33   0.23 
AL132860-10|CAB60525.1|  615|Caenorhabditis elegans Hypothetical...    32   0.41 
AL132860-9|CAB60524.1|  647|Caenorhabditis elegans Hypothetical ...    32   0.41 
U58752-2|AAB00665.1|  571|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF098985-1|AAC67419.2|  882|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z99280-6|CAB16502.1|  418|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z82284-9|CAB05295.1|  418|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>AL132949-16|CAB61089.1|  535|Caenorhabditis elegans Hypothetical
           protein Y53F4B.18 protein.
          Length = 535

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = +1

Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRG-VFFRNGDEESMFSLGFIAKHVEDLAPLT 432
           GSD+GGS RMPAF+ G+FG  PTPG   L G V    G +  M  +G + +  EDL  + 
Sbjct: 227 GSDIGGSIRMPAFFNGVFGLKPTPGVIPLIGHVPEPTGYKTHMLRIGPMCRFAEDLPLML 286

Query: 433 KIVAGDKAKELNLDKDVDIKNIKFNYLES-TNDVCVSSVRAELKGAMKRAI 582
           +I+AG+ A+ LNL + V  K ++  Y+E  T    +  +  E++ A+K+A+
Sbjct: 287 RIMAGENAQSLNLHEPVSGKKLRVFYMEGITGSPIIQPLEDEMRYALKKAV 337


>AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical
           protein Y41D4A.6 protein.
          Length = 452

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
 Frame = +1

Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGV--FFRNGDEESMFSLGFIAKHVEDLAPL 429
           GSD GGSTR PA + G+FG  PT G  +  G+     + D  S+F+    A+   +L  L
Sbjct: 147 GSDTGGSTRNPAAFNGIFGFKPTYGVLSRNGLIPLVNSLDAPSIFAK--TAQKCWELLEL 204

Query: 430 TKIVAGDKAKELNLDKDVDIKNIK 501
           +K +  + +  + L +   I +++
Sbjct: 205 SKGIDKNDSTSVELPEKAGISSLE 228


>AL132860-4|CAB60496.1|  762|Caenorhabditis elegans Hypothetical
           protein Y56A3A.5 protein.
          Length = 762

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVF-FRNGDEESMFSLGFIAKHVEDLAPLT 432
           G+DL GS R+PA +CG+    PT    +   +     G     +S GF  ++VED   L 
Sbjct: 378 GNDLVGSLRIPAAFCGLVSLKPTQDRLHESEMHPGLPGRGRLGYSCGFFTRNVEDQEYLL 437

Query: 433 KIVAG 447
           ++V G
Sbjct: 438 RLVIG 442


>AF045643-6|AAC02593.2|  570|Caenorhabditis elegans Hypothetical
           protein F58H7.2 protein.
          Length = 570

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +1

Query: 256 GSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGVFFRNGDEESMFSL-GFIAKHVEDLAPLT 432
           G+D+GGS R PA +CG+ G   +   +   G        + + S+ G IAK+++      
Sbjct: 230 GTDVGGSIRTPASFCGLAGFKSSSDRSPQLGKTASIPGRQLLLSVEGPIAKNIDVCVEYL 289

Query: 433 KIVAGDKAKELNLDKDVDIKNIKF 504
           ++   D    L   KDV +  +KF
Sbjct: 290 RLKWND---PLLYKKDVYMPPVKF 310


>AL132860-10|CAB60525.1|  615|Caenorhabditis elegans Hypothetical
           protein Y56A3A.12b protein.
          Length = 615

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 256 GSDLGGSTRMPAFYCGMFGHHPT 324
           GSDL GS R+PA +CG+    PT
Sbjct: 226 GSDLAGSLRIPAAFCGLVTLKPT 248


>AL132860-9|CAB60524.1|  647|Caenorhabditis elegans Hypothetical
           protein Y56A3A.12a protein.
          Length = 647

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 256 GSDLGGSTRMPAFYCGMFGHHPT 324
           GSDL GS R+PA +CG+    PT
Sbjct: 258 GSDLAGSLRIPAAFCGLVTLKPT 280


>U58752-2|AAB00665.1|  571|Caenorhabditis elegans Hypothetical
           protein B0218.2 protein.
          Length = 571

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 235 DDWMLMKGSDLGGSTRMPAFYCGMFGHHPTPGSTNLRGV 351
           D  +L  G D+GGS R+P  Y G  G  P+    + RGV
Sbjct: 226 DGSLLGIGGDVGGSIRIPCAYTGTTGIKPSHLRFSHRGV 264


>AF098985-1|AAC67419.2|  882|Caenorhabditis elegans Hypothetical
           protein C08G5.1 protein.
          Length = 882

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 397 IAKHVEDLAPLTKIVAGDKAKELNLDKDVDIKNIKFNY-LES 519
           +A    DL PL  ++AG K +  N+D + D KN+K  Y LES
Sbjct: 617 MASQKVDLKPLKVLIAGIKVEMKNVDPE-DAKNLKSLYGLES 657


>Z99280-6|CAB16502.1|  418|Caenorhabditis elegans Hypothetical
           protein Y57G11B.1 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +1

Query: 400 AKHVEDLAPLTKIVAGDKAKELNLDKDVDIKNIKFNYLESTNDVCVSSVRAELKGAMKRA 579
           AK + +   +T     +  + +N D  V I N+  N L+  ND   S    ELK A + +
Sbjct: 10  AKLITETVQITINSISETLETINSDPTVRIDNL--NELKRRNDEAHSQYMKELKEAREES 67

Query: 580 ISKITQELTTADA 618
              + +   TAD+
Sbjct: 68  DDALAKRQATADS 80


>Z82284-9|CAB05295.1|  418|Caenorhabditis elegans Hypothetical
           protein Y57G11B.1 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +1

Query: 400 AKHVEDLAPLTKIVAGDKAKELNLDKDVDIKNIKFNYLESTNDVCVSSVRAELKGAMKRA 579
           AK + +   +T     +  + +N D  V I N+  N L+  ND   S    ELK A + +
Sbjct: 10  AKLITETVQITINSISETLETINSDPTVRIDNL--NELKRRNDEAHSQYMKELKEAREES 67

Query: 580 ISKITQELTTADA 618
              + +   TAD+
Sbjct: 68  DDALAKRQATADS 80


>Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical
           protein T23F6.5 protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 603 QLLSYFGYRSFHRTLELSP 547
           QLLS+FG RSF  T  LSP
Sbjct: 45  QLLSFFGIRSFVCTCHLSP 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,925,040
Number of Sequences: 27780
Number of extensions: 318217
Number of successful extensions: 932
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)