Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_I17
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0084 + 19899972-19900075,19900187-19900259,19900343-199004...    48   5e-06
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473...    33   0.26 
09_02_0481 - 9772783-9773985                                           29   4.3  
08_01_0430 + 3774769-3774966,3776951-3777142                           28   7.5  
02_05_0685 + 30891289-30891810,30892740-30892915,30893379-308934...    28   7.5  
05_05_0220 + 23380290-23381581,23381997-23383458                       27   9.9  
03_05_0541 + 25381403-25382077,25382555-25383904,25386267-253864...    27   9.9  

>11_06_0084 +
           19899972-19900075,19900187-19900259,19900343-19900443,
           19901502-19901637
          Length = 137

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 28/101 (27%), Positives = 49/101 (48%)
 Frame = +2

Query: 233 SLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDI 412
           +LL Q + ++ALK  L   PL + +++ K     +  + ++AI+   ++    SL  +  
Sbjct: 31  TLLKQSKPVEALKTALEGTPLKTRDERCKSANWIVVHRAMMAIRD--VDGMFNSLDPEYY 88

Query: 413 DNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGLYSKS 535
           D LMKY+Y+G       +    L  H+K     GLG   +S
Sbjct: 89  DILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRS 129


>09_04_0435 - 17545879-17546605,17546721-17546782,17547123-17547335,
            17547506-17547590,17547904-17548061,17548174-17548294,
            17548765-17548927,17548973-17549097,17550800-17550888,
            17550970-17551636,17552671-17552717,17553506-17553862
          Length = 937

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +2

Query: 149  IDQYNEDNFKEDEAEQAGPTGPDEGEVCSLL--NQGRHIDALKLVLNNAPLGSSNQQVKE 322
            +DQ  E         QAG  G DEG+V      NQG+H D+ +    ++ + SSN+++ E
Sbjct: 848  VDQAAEVEMLHQHQHQAGRGGWDEGDVMPFFYSNQGKHHDSSR----SSNISSSNRKLTE 903

Query: 323  NALTL 337
               T+
Sbjct: 904  QRRTI 908


>09_02_0481 - 9772783-9773985
          Length = 400

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 306 LDDPSGALFNTSLSASICLP*FNNEHTSPSSGPVGPAC 193
           +++  G + NT          F NEH  P + P+GP C
Sbjct: 131 IEESHGLIINTFHGLEAPYIKFWNEHVGPRAWPIGPLC 168


>08_01_0430 + 3774769-3774966,3776951-3777142
          Length = 129

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 164 EDNFKEDEAEQAGPTGPDEGEVCSLLNQGR 253
           E+  +E+E + A   GPD   +CSLL QGR
Sbjct: 3   EEKKEEEEEKAAAAEGPDL--LCSLLEQGR 30


>02_05_0685 + 30891289-30891810,30892740-30892915,30893379-30893492,
            30893846-30893954,30894038-30894124,30895137-30895736,
            30895823-30896101,30896808-30896897,30897151-30897507,
            30897924-30898160,30898733-30898953,30899856-30899955,
            30900042-30900188,30900287-30900385
          Length = 1045

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
 Frame = +2

Query: 194  QAGPTGPDEG-EVCSLLNQGRHIDALKLVLNNAPLGSSNQQVK-ENALTLTL----KVLL 355
            Q  PTG  E  ++  ++ + R +D    V+   PLG +   ++ EN L L +    KVLL
Sbjct: 846  QIEPTGWKEFLQISKVIQEARALDINTQVIY--PLGETAAAIRGENELWLAMVLRNKVLL 903

Query: 356  AIKSAQIEEAVGSLSLDDI 412
             +K +Q+    GSL  + I
Sbjct: 904  DLKPSQLAAICGSLVSEGI 922


>05_05_0220 + 23380290-23381581,23381997-23383458
          Length = 917

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
 Frame = +2

Query: 335 LTLKVL-LAIKSAQIEEAVGSLSLDDID--------NLMKYIYKGFEFPSEGSSGHLLLW 487
           +T+ VL   ++SA    AV +   DD D        N  K +  G   P   + GH LL 
Sbjct: 575 VTITVLNRRVRSAASHSAVPTALSDDYDSQSPENEANPGKLVMFGRGSPDFSAGGHALLN 634

Query: 488 HDKAYSVGGLGLYSKSSFRQNESVIIINTT 577
            D     GG G   K+  R  + V I   T
Sbjct: 635 KDCELGRGGFGTVYKAVLRDGQPVAIKKLT 664


>03_05_0541 +
           25381403-25382077,25382555-25383904,25386267-25386402,
           25386642-25387126
          Length = 881

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 110 AKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGE 226
           AK+ +  +    D D+Y+ED+  +D  E  G TG DE E
Sbjct: 842 AKDAIFGSTDSSDDDEYDEDDDTDDNDEDEGITG-DEVE 879


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,998,948
Number of Sequences: 37544
Number of extensions: 273751
Number of successful extensions: 606
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)