Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_I14
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 32 0.062
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 32 0.083
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 31 0.19
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 31 0.19
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 29 0.44
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 29 0.58
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 28 1.3
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 27 2.3
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 27 3.1
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 4.1
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 26 4.1
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 26 5.4
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 26 5.4
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 5.4
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 26 5.4
SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces ... 26 5.4
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 25 7.2
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 9.5
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 25 9.5
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 32.3 bits (70), Expect = 0.062
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 139 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKK 297
K +TV+GGG++G + V ++ G VT+V+ I LSR+ K
Sbjct: 218 KKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGGPMDADISKALSRIISK 270
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 31.9 bits (69), Expect = 0.083
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 142 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 264
+V +IGGG G+G+A ++ G NV L++ ++ A + KS
Sbjct: 69 DVLIIGGGATGTGVAVDASTRGLNVCLLEKTDFASETSSKS 109
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 30.7 bits (66), Expect = 0.19
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +1
Query: 106 FSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSR 285
F S NV V+G G + + Q + AG NVT+ S++ L AKK T+
Sbjct: 156 FGSKEHQVKPGNNVLVLGTGGVSTFALQFALAAGANVTVTSSSDEKLEFAKKLGATHTIN 215
Query: 286 VAKKMYKDNPQ 318
YK PQ
Sbjct: 216 -----YKKTPQ 221
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 30.7 bits (66), Expect = 0.19
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 139 KNVTVIGGGL-MGSGIAQVSAQAGQNVTLVDVSNDALAKAKK 261
KN V G +G IA AQAG NV + ++ D KAKK
Sbjct: 22 KNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKK 63
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 29.5 bits (63), Expect = 0.44
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 139 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAK 252
KNV VIGGG G A +++ G TL+ S D + +
Sbjct: 17 KNVVVIGGGHAGVEAAAAASRLGAKTTLLTKSFDNIGQ 54
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 29.1 bits (62), Expect = 0.58
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 94 IVRNFSSSSAM--QSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSI 267
I+RNF SSA+ QS++ NV V GG + ++ A L +V D K K
Sbjct: 581 IIRNFQFSSALKRQSSVSNVRVSGGSFK-TFVSVKGAPEVIATMLREVPKD-YEKIYKDY 638
Query: 268 GTNLSRVAKKMYK 306
G SRV YK
Sbjct: 639 GRKGSRVLALGYK 651
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 151 VIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALA--KAKKSIGTNLSRVAKKMYKDNPQEG 324
VIGGGL G G NV L+D N A K + G N + + +
Sbjct: 43 VIGGGLAGLSATNTILDLGGNVLLLD-KNTAFGGNSVKAASGINAAPTQLQFDQHVSDSV 101
Query: 325 EKFVNDSL 348
F NDS+
Sbjct: 102 NTFYNDSI 109
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 108 FKFLCNAKCYQECNGYWRWSNGL 176
F F+CNA Y N Y W+ L
Sbjct: 619 FYFVCNATSYSSLNPYGNWARPL 641
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 520 EIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKT 645
E++ V +F GLHF V R L G + Y+T
Sbjct: 250 EVSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRT 291
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 501 CV*CENSV-TWSYAIKLLKQFMLHSNIFNN 415
CV CE +W + +K + Q ++H+N N
Sbjct: 406 CVLCERKFQSWGHVVKHITQSIMHNNNLKN 435
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 96 RKKFFKFLCNAKCY 137
RK+FF FL N +CY
Sbjct: 629 RKRFFDFLVNTQCY 642
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 127 QSAIKNVTVI--GGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIG 270
QS ++ +I GGG++G + V+A + + + + LA SIG
Sbjct: 101 QSCTRDTILIAMGGGVIGDLVGYVAASFMRGIRFIQMPTTLLAMVDSSIG 150
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 232 SNDALAK---AKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSAD 399
S DA+ K A K+ NL +V+ D P+ F ND + + +T A +K AD
Sbjct: 254 STDAVPKKLDASKASSLNLEKVS--YLTDEPKFRFDFNNDEMAVVKLSTGIAAFAKDAD 310
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 25.8 bits (54), Expect = 5.4
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 214 VTLVDVSNDALAKA--KKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEAS 387
+T V + LA+A K I + + K K P+E E F+ L N + E
Sbjct: 861 ITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKG 920
Query: 388 KSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSS---LSINEIASVVKRKD 549
+ D + I+ + +LFKQ+ + + N + ++E+ +R++
Sbjct: 921 ELDDDELNEILARGDDELRLFKQMTEDLERESPYGKNKEKERLIQVSELPEFYQREE 977
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 277 LSRVAKKMYKDNPQEGEKFV--NDSLGRINTATDAA--EASKSAD 399
+S++A+ NP + E+FV D+LG D+ EAS AD
Sbjct: 102 ISKIAEAAQASNPDDEEEFVMEEDNLGEAPLLVDSESYEASVKAD 146
>SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 172 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRV 288
GS + + A + +SND+LAKA S+ T++S++
Sbjct: 317 GSFTTHLDSNASMAKSFSQISNDSLAKA-SSVATSMSQM 354
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 416 IASTTRSADLEASAASVAVLILPSESF--TNFSPSWGLSLYIFF 291
+ TT + D + SV + P + + T+ PS+GL LY+FF
Sbjct: 308 VTPTTYANDKSETLRSVMIR-QPMDLYIITDHGPSYGLYLYLFF 350
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 252 SQEEHWHKPQQGRKEDVQR*SPRRREICE 338
+QE+ W K +Q KE+++R RREI E
Sbjct: 19 NQEKVW-KDEQAHKEEMKRVEQLRREIEE 46
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 536 TTDA-ISFIDREDVFDAKIV*LGATPSSCLNNLCFTPIFSTIAST 405
T DA ++F+DR VFD +I L + LN C +AST
Sbjct: 371 TVDAELAFVDRSFVFDLEIKKLFVQTLTPLNETCSEWWGELLAST 415
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.129 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,498,089
Number of Sequences: 5004
Number of extensions: 49769
Number of successful extensions: 143
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -