Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_I13
(564 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 4e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 49 4e-06
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 44 1e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 44 1e-04
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 40 0.002
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 38 0.009
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 37 0.016
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 37 0.016
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 37 0.022
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 37 0.022
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 37 0.022
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 37 0.022
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 37 0.022
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 37 0.022
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 37 0.022
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 36 0.038
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 36 0.038
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 35 0.066
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 35 0.066
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 35 0.087
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 35 0.087
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 35 0.087
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 33 0.20
AY122264-1|AAM52776.1| 311|Drosophila melanogaster SD14666p pro... 29 5.7
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 29 5.7
AE014296-2771|AAF49436.1| 307|Drosophila melanogaster CG4098-PA... 29 5.7
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 49.2 bits (112), Expect = 4e-06
Identities = 35/114 (30%), Positives = 49/114 (42%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 312
GDFN H +G TT+ G +D +L LLN SPT + N + +DL++C+P
Sbjct: 130 GDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTY-THIDLTLCSPI 188
Query: 311 LAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNL 150
LA SDHF ++ R +KL A+W F L
Sbjct: 189 LAPHAKWKILNDLHGSDHFPIITTLFPTTN--PQKFYRPFFKLKEANWEQFNAL 240
Score = 46.4 bits (105), Expect = 3e-05
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = -1
Query: 132 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+SYRPI+L+ + K+ + ++ RL W + NN I + Q+GF+K
Sbjct: 506 SSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKK 548
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -1
Query: 141 NDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKS 1
+D+ SYRPI+L S L K E ++ RL WFI+ +N I+++Q F+ +
Sbjct: 508 SDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSN 554
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/116 (27%), Positives = 50/116 (43%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 312
GD N ++G T+T G + ++ +L +LN GSPT + N + +D+S+ +P
Sbjct: 134 GDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLSTHNTF-THIDISLISPQ 192
Query: 311 LAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNLVE 144
+A SDHF P +P KYK + A+W F E
Sbjct: 193 IAHMCSWSISDNLHGSDHFPITIHINTPTRP-DNTLPLPKYKTDQANWKRFNESCE 247
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFR 7
SYRPI+L S L+K+ E L+K RL F++ +N + QYGFR
Sbjct: 537 SYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFR 577
Score = 36.3 bits (80), Expect = 0.029
Identities = 29/120 (24%), Positives = 43/120 (35%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 312
GDFN H+ + C + G L E+ DL +L PT N K A L +C +
Sbjct: 160 GDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPT-YIPHNHKAKASTLDLCLTN 218
Query: 311 LAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNLVESMML 132
+ SDH K P L A+W+ FK ++ ++
Sbjct: 219 IPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYP----ILGRANWALFKRIINERLM 274
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFR 7
SYRPI+L S L+K+ E L+K RL F++ +N + QYGFR
Sbjct: 485 SYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFR 525
Score = 36.3 bits (80), Expect = 0.029
Identities = 29/120 (24%), Positives = 43/120 (35%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 312
GDFN H+ + C + G L E+ DL +L PT N K A L +C +
Sbjct: 108 GDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPT-YIPHNHKAKASTLDLCLTN 166
Query: 311 LAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNLVESMML 132
+ SDH K P L A+W+ FK ++ ++
Sbjct: 167 IPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYP----ILGRANWALFKRIINERLM 222
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSI 324
GD+N H ++G G L E L + +L TGSPTR P+ PS +D ++
Sbjct: 137 GDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAV 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
SYRPI+L S L+K+ E L+ NRL + + + Q+GFR+
Sbjct: 513 SYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQ 554
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L + + ++ ++ TGS T K PSA+D SIC
Sbjct: 164 GDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSIC 222
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1
Query: 141 NDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
N+ SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 565 NEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRK 610
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -1
Query: 138 DVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFR 7
DV SYRPI+L L K+ E L+ NRL + I Q+GFR
Sbjct: 313 DVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFR 356
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
SYRP+ L ++ K+ E ++ R+E E+ + QYGFRK
Sbjct: 478 SYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRK 519
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1
Query: 141 NDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
N+ SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 553 NEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRK 598
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 36 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 94
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 144 INDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+ND SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 436 VNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRK 482
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -1
Query: 171 LVCI*EPCRINDVAS-YRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKS 1
++ I +P + + VAS YRPI+L S ++K+ E + RL +N I Q+GFR+S
Sbjct: 495 IIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRES 552
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 144 INDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+ND SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 552 VNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRK 598
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 144 INDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+ND SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 552 VNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRK 598
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 114 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 172
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 144 INDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+ND SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 514 VNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRK 560
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 144 INDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+ND SYRPI+L S L+K+ E L+ RL I Q+GFRK
Sbjct: 552 VNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRK 598
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = -1
Query: 132 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+SYRPI+L + L+K+ E ++ R+ + NN + Q+GFR+
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFRE 549
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = -1
Query: 132 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
+SYRPI+L + L+K+ E ++ R+ + NN + Q+GFR+
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFRE 549
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -1
Query: 138 DVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFR 7
DV SYRP +L L K+ E L+ NRL + I Q+GFR
Sbjct: 511 DVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFR 554
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 1/119 (0%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSICTP 315
GD+N H +G + G L E++ +L TG PT + P PSA+D I T
Sbjct: 137 GDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFI-TC 195
Query: 314 DLAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNLVESM 138
SDH K+ RV+ +NAD + FK +E +
Sbjct: 196 GYGMGRLDVQTLQELSSDHLPILAVLHATPL---KKPQRVRLLAHNADINIFKTHLEQL 251
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 132 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFR 7
ASYRPI+L ++KV E L+ R+ +E Q+GFR
Sbjct: 511 ASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFR 552
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTR 369
GD+N H ++G G ++ G+ L ++ + L TG PTR
Sbjct: 136 GDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTR 176
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.087
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVE-ILDLQNLCLLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+NC H+++G + G L + IL ++L ++ TG T +K PSA+D +IC
Sbjct: 156 GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAIC 214
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
SYRPI+L S L+K+ E ++ RL I + Q+GFRK
Sbjct: 560 SYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRK 601
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.087
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVE-ILDLQNLCLLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+NC H+++G + G L + IL ++L ++ TG T +K PSA+D +IC
Sbjct: 156 GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAIC 214
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
SYRPI+L S L+K+ E ++ RL I + Q+GFRK
Sbjct: 560 SYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRK 601
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.087
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 491 GDFNCHHQMFGCGTTDTNGVHLVE-ILDLQNLCLLNTGSPTRRTKPNEK-PSAVDLSIC 321
GD+NC H+++G + G L + IL ++L ++ TG T +K PSA+D +IC
Sbjct: 156 GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAIC 214
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
SYRPI+L S L+K+ E ++ RL I + Q+GFRK
Sbjct: 560 SYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRK 601
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 129 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRK 4
SYRPI+L S L+K+ E ++ RL I + Q+GFRK
Sbjct: 113 SYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRK 154
>AY122264-1|AAM52776.1| 311|Drosophila melanogaster SD14666p
protein.
Length = 311
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 327 NLYPRSCFFSFLVHLIIYFWQ*SFPDYHILSY*TPSL 217
N+YPRS + V FW FPDY +Y P +
Sbjct: 49 NMYPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHI 85
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = -1
Query: 171 LVCI*EPCRINDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGF 10
++ I +P + SYRPI+L + L+K+ E + R+ ++ +N + + Q+ F
Sbjct: 35 IIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDF 88
>AE014296-2771|AAF49436.1| 307|Drosophila melanogaster CG4098-PA
protein.
Length = 307
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 327 NLYPRSCFFSFLVHLIIYFWQ*SFPDYHILSY*TPSL 217
N+YPRS + V FW FPDY +Y P +
Sbjct: 45 NMYPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHI 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,862,811
Number of Sequences: 53049
Number of extensions: 395990
Number of successful extensions: 830
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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