Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_I02
         (657 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422...    29   2.5  
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160...    29   4.3  
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322...    28   7.5  
07_01_0042 - 334417-334431,334563-334688,334852-335136,335220-33...    28   7.5  
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019           28   7.5  
05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851,666...    27   9.9  
01_02_0089 - 10997882-10997957,10998139-10998423,10998519-109985...    27   9.9  

>06_01_0588 -
           4224348-4224516,4224674-4224767,4224872-4225490,
           4225609-4225734,4225819-4226487,4226728-4226853,
           4226940-4227266,4227366-4227439,4228469-4228583,
           4228871-4229164
          Length = 870

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 499 LESGRLEALSRALSILNGDSAVQGRVESYSCKMAGSEKAFYKKFTAD 639
           L+ G+  +L RAL     +  + G  + Y C+    +    KKFT D
Sbjct: 182 LDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTID 228


>10_01_0132 -
           1601421-1601657,1601761-1601922,1602812-1603721,
           1604587-1604651,1604704-1604746,1605086-1605128,
           1605874-1605955,1606270-1606464,1606567-1606721,
           1611207-1611435,1611538-1611693,1612539-1613476,
           1614946-1614967
          Length = 1078

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 343 TLGIKFDFCSSSARMKCGNITKKEKRMVLEVAVLV 239
           +L I FDF   + R++C  + KKE+  +L+  ++V
Sbjct: 585 SLLIAFDFGEEATRLQCEMVVKKEEATLLQCEMVV 619


>08_01_0364 -
           3218309-3218414,3218882-3218941,3219898-3219969,
           3220080-3223195,3223303-3223561,3223665-3223951,
           3224029-3224364,3224463-3224604,3224690-3224910,
           3224990-3225151,3225242-3225400,3225488-3225787,
           3226306-3226569,3227370-3227453
          Length = 1855

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -2

Query: 161 GYFQKP--KSIEDIVAKYNHXLENKLFD*LNYL 69
           GY Q+   K++EDI+ KY+  + N L D + +L
Sbjct: 853 GYIQRRLVKAMEDIIVKYDGTVRNSLGDVIQFL 885


>07_01_0042 -
           334417-334431,334563-334688,334852-335136,335220-335368,
           336239-336536,337030-337131,337245-337613,337973-338115,
           338334-338518,339246-339475,339734-339821,340158-340253,
           340397-340512,340604-340852,340950-341175,341411-341622
          Length = 962

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 294 HFIRAEEEQKSNLIPSVNLLHSKRKGIFIHPTAMYRN 404
           HF+R    Q  N     +LL +   G F+HPT +++N
Sbjct: 579 HFMRHSANQIDNPTSVQHLLVNGCGGAFLHPTHVFKN 615


>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
          Length = 508

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -3

Query: 442 IIGAFIFIL---HHKLFLYIAVGCMNIPFLF 359
           I+G F F+    H ++FL++ +GC  + F+F
Sbjct: 436 IVGVFGFLYTEYHIRIFLFVLIGCNLVGFIF 466


>05_02_0107 -
           6667944-6668214,6668376-6668524,6668654-6668851,
           6668989-6669250,6669378-6670327,6670907-6671022,
           6671121-6671280
          Length = 701

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 316 SSSARMKCGNITKKEKRMVLEVA-VLVLIIHKLVDGF 209
           ++S++ +CG  T  +   +L V+ V+ L++HK  DGF
Sbjct: 100 TNSSKYQCGKFTVGKFLSLLMVSGVIYLLVHKSSDGF 136


>01_02_0089 -
           10997882-10997957,10998139-10998423,10998519-10998589,
           10998685-10998761,10998858-10998963,10999062-10999189,
           10999291-10999423,11000005-11000133,11000220-11000375,
           11000770-11000846,11000938-11000998,11001249-11001383,
           11001642-11001765,11001852-11001917,11002010-11002112,
           11002603-11002652,11003795-11003895
          Length = 625

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 580 FQRGLVQHCRHSE*TELCLMLPNDHFPIVS 491
           F+R L ++C  ++  E+C+ML  DH P VS
Sbjct: 408 FKRSLPRYC--TQFIEMCIMLCADHGPCVS 435


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,442,657
Number of Sequences: 37544
Number of extensions: 300463
Number of successful extensions: 625
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)