Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_I02
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098499-1|AAC67397.1| 245|Caenorhabditis elegans Hypothetical ... 33 0.18
U39745-6|AAA80448.2| 392|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125442-9|AAD12788.1| 333|Caenorhabditis elegans Hypothetical ... 29 2.9
Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical p... 28 5.1
AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical ... 28 6.7
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY594354-1|AAT01444.1| 539|Caenorhabditis elegans cofactor-inde... 27 8.9
AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical... 27 8.9
AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical... 27 8.9
>AF098499-1|AAC67397.1| 245|Caenorhabditis elegans Hypothetical
protein C43H8.2 protein.
Length = 245
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 490 MKLLESGRLEALSRALSILNGDSAVQGRVESYSCKMAGSEKAFYK 624
MK LES ++ S+ L D + ++E+YS KM SEK +K
Sbjct: 1 MKFLESSEMDVFSQTLVTGAIDCVIDFKLETYSSKMVTSEKKQWK 45
>U39745-6|AAA80448.2| 392|Caenorhabditis elegans Hypothetical
protein F41C6.7 protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 141 FWFLKITVVFLHSKK*SDASHCVNPSTSLWIINTSTATSKTILFSFFVMFPHFIRAEEEQ 320
FW K + FL + + S+ +N + S +T ++ F ++V F H + A ++Q
Sbjct: 8 FWLFKNSQTFLFTLRNSEKVSILNNNFG------SRSTFYSLQFLYYV-FSHRMSASQKQ 60
Query: 321 KSNLIPSVNL 350
K +P+VNL
Sbjct: 61 KVVKVPTVNL 70
>AF125442-9|AAD12788.1| 333|Caenorhabditis elegans Hypothetical
protein H04M03.3 protein.
Length = 333
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -3
Query: 331 KFDFCSSSARM---KCGNITK-KEKRMVLEVAVLVLIIHKLVDGFTQWLASLHFLECRNT 164
+FD C +A + K G + +E M+ + +I HK++D SLHF+ +
Sbjct: 125 QFDICILNAGVMNPKPGRTREDREATMMTNLVSSYMIAHKIIDSRRDDQRSLHFVFSTSI 184
Query: 163 TVIFKNQNP 137
V F N P
Sbjct: 185 LVKFHNATP 193
>Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical
protein F11A5.15 protein.
Length = 191
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -3
Query: 502 PIVSFSLILFCSNYPINRLVIIGAFIFILHHKLFLYIA---VGCMNIPFLFECK 350
P+++ S++ FC+ + + L I I++ KLF I V C+N +F+ K
Sbjct: 138 PLITISVLFFCAFFILIFLFCILGSIYVFMAKLFRNIEQTYVACLNRLMIFDEK 191
>AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical
protein Y46H3C.4 protein.
Length = 616
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 457 SDNLNRIKSE-KMKLLESGRLEALSRALSILNGDSAVQGRVESYSCKMAGSEKAF 618
+D + + K E K+KL ESG ++ A + D V ++ K++G E F
Sbjct: 355 ADPVKKWKEEQKLKLRESGEMDEDDLATVAVEDDEGVSSAAKAVETKLSGYEYLF 409
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 198 SHCVNPSTSLWIINTSTATSKTILFSFFVMFPHFIRAE 311
S CV+PS W+I +K +FV+F AE
Sbjct: 13 SRCVHPSCVAWVIFIHFCFAKNCSILYFVLFQFTFFAE 50
>AY594354-1|AAT01444.1| 539|Caenorhabditis elegans
cofactor-independent phosphoglyceratemutase protein.
Length = 539
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 323 LLFFFRADEMREHHKKGEKDGFRSCSTSINYPQTC*WVYTMARVTSLF 180
+ F +RAD MRE D ++ C++ + +P VY M + + F
Sbjct: 279 IFFDYRADRMREISAAMGMDRYKDCNSKLAHPSNL-QVYGMTQYKAEF 325
>AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical
protein F57B10.3b protein.
Length = 521
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 323 LLFFFRADEMREHHKKGEKDGFRSCSTSINYPQTC*WVYTMARVTSLF 180
+ F +RAD MRE D ++ C++ + +P VY M + + F
Sbjct: 261 IFFDYRADRMREISAAMGMDRYKDCNSKLAHPSNL-QVYGMTQYKAEF 307
>AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical
protein F57B10.3a protein.
Length = 539
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 323 LLFFFRADEMREHHKKGEKDGFRSCSTSINYPQTC*WVYTMARVTSLF 180
+ F +RAD MRE D ++ C++ + +P VY M + + F
Sbjct: 279 IFFDYRADRMREISAAMGMDRYKDCNSKLAHPSNL-QVYGMTQYKAEF 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,438,924
Number of Sequences: 27780
Number of extensions: 307775
Number of successful extensions: 788
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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