Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_H24
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890     29   4.3  
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444...    28   5.6  
03_05_0865 - 28365430-28367640                                         28   7.5  

>01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890
          Length = 595

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 389 NFVLSFDMWA-DAGLHVILSDAADKSVRDGESRV 291
           N  LSFD W  D  LH+++    D   R+  SRV
Sbjct: 12  NRALSFDDWVPDEALHLVMGHVEDPRDREAASRV 45


>02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,
            4441075-4441120,4442470-4442521,4442601-4442753,
            4443338-4443457,4443549-4443714,4443822-4443934,
            4444049-4444120,4444992-4445213,4445270-4445317,
            4445639-4445697,4445809-4445887,4445982-4446119,
            4446327-4446551,4446643-4447430,4447548-4447723,
            4447911-4448169,4448646-4448707,4451055-4451212,
            4451618-4451743,4452197-4452260,4452386-4452494,
            4452607-4452760,4453055-4453178,4453257-4453333,
            4453442-4453494,4453673-4453727,4453833-4454021
          Length = 1379

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +1

Query: 271  WTRTAGYTLLSPSRTDLSAASERITCNPASAHMSKDKTKLNITNIISGFVLCYSFKQSCF 450
            W+    Y L    + +L A  +RI       HM +    LN+T  I        FKQ+ F
Sbjct: 1210 WSFEEAYNLSRDHKPELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDM----EFKQNKF 1265

Query: 451  MFP 459
            + P
Sbjct: 1266 LPP 1268


>03_05_0865 - 28365430-28367640
          Length = 736

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -1

Query: 332 DAADKSVRDGESRVYPAVRVHNSERDFINDAVNRVTDVLSRRDEKRERDQD 180
           D++    RD   R     R  + +RD   D   R  D  SRRD  R+RD+D
Sbjct: 62  DSSSSHHRDSSDRDRDRDRDRDRDRDRDRDRERRRDDD-SRRDRDRDRDRD 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,787,841
Number of Sequences: 37544
Number of extensions: 371493
Number of successful extensions: 1092
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)