Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_H22
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical ...    41   6e-04
Z83238-4|CAB05795.1|  341|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z83109-10|CAB05520.2|  435|Caenorhabditis elegans Hypothetical p...    27   7.8  
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    27   7.8  

>AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical
           protein H43I07.2 protein.
          Length = 366

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 16/35 (45%), Positives = 26/35 (74%)
 Frame = +1

Query: 373 DNFEMEFDLIGIQPAFANAFRKLMLSEVPSMAIEK 477
           D   +EFD+  I+   ANA R+++++EVP+MA+EK
Sbjct: 64  DGMTLEFDITRIEAPIANALRRVLIAEVPTMALEK 98


>Z83238-4|CAB05795.1|  341|Caenorhabditis elegans Hypothetical
           protein T08G3.5 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = -1

Query: 399 QVKFHFEIVHSYYNYLKLLHKLFEVPCFIV*SVIFGCILNTEFFKKNSGFFIEFRHFCNI 220
           +VK    ++H  + +L + + +  +P FIV  +  G  L   ++ +   +FI +  F ++
Sbjct: 48  RVKISMLVMHLTFAWLDIYNSVLSIPIFIV-PIFSGYPLGLLYYSRVPTWFITYLGFTSV 106

Query: 219 LL 214
            L
Sbjct: 107 FL 108


>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
            protein F47C12.1 protein.
          Length = 1827

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 339  CEEV*DSCSTNGQFRNG 389
            CEE+ D CSTN   RNG
Sbjct: 1782 CEEITDICSTNNPCRNG 1798


>Z83109-10|CAB05520.2|  435|Caenorhabditis elegans Hypothetical
           protein F44G3.8 protein.
          Length = 435

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 276 EFFKKNSGFFIEFRHFCNILLINVNKVLSYF 184
           E FKK+    ++  HF N  L  ++ VL YF
Sbjct: 271 EIFKKDRCLQVKTVHFTNFTLSEISSVLPYF 301


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 288 ILNTEFFKKNSGFFIEFRHFCNILLINVNKVLSYF 184
           IL  +FFKKN  FF+ F +    +  N  K  ++F
Sbjct: 333 ILTKKFFKKNLFFFLIFNNLEKSIFSNFKKSNTFF 367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,857,614
Number of Sequences: 27780
Number of extensions: 230038
Number of successful extensions: 456
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)