Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_H19
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 215 3e-56
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 213 1e-55
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 208 3e-54
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 1.0
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 30 1.8
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 29 2.4
01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336... 29 3.2
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.6
04_01_0289 + 3830052-3831134,3831141-3831230,3831494-3831525,383... 28 5.6
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 9.7
09_06_0319 - 22293869-22293906,22294539-22295808 27 9.7
08_02_0567 + 18769742-18769790,18769928-18771351 27 9.7
06_03_0804 + 24761974-24763196,24763674-24764019 27 9.7
06_02_0084 - 11547820-11548773 27 9.7
05_01_0592 + 5332067-5332233,5332326-5332488,5332572-5332642,533... 27 9.7
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 27 9.7
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 215 bits (525), Expect = 3e-56
Identities = 101/147 (68%), Positives = 117/147 (79%)
Frame = +1
Query: 130 PRSXIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIR 309
P+ I+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ KN GKD FH+R
Sbjct: 29 PKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLR 88
Query: 310 MRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQV 489
+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR +
Sbjct: 89 VRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHA 148
Query: 490 IEALRRAKFKFPGRQKIYVSKEVGFHK 570
EALRRAKFKFPGRQKI S++ GF K
Sbjct: 149 EEALRRAKFKFPGRQKIIHSRKWGFTK 175
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +3
Query: 45 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKI 137
MGRRPARCYR KNKPYPKSR+CRGVPDPKI
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKI 31
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 524 PDVKRSTYQKKWGFTKYERDEFEKLREEGRLANDGCIVQ 640
P ++ + +KWGFTK+ R+E+ KL+ EGR+ +DG Q
Sbjct: 160 PGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQ 198
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 213 bits (519), Expect = 1e-55
Identities = 99/145 (68%), Positives = 116/145 (80%)
Frame = +1
Query: 130 PRSXIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIR 309
P+ IFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+ K+ GKD FH+R
Sbjct: 336 PKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLR 395
Query: 310 MRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQV 489
+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++SVR D A
Sbjct: 396 VCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDANAAHA 455
Query: 490 IEALRRAKFKFPGRQKIYVSKEVGF 564
EALRRAKFKFPGRQ++ S + GF
Sbjct: 456 QEALRRAKFKFPGRQRVIFSAKWGF 480
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +3
Query: 57 PARCYRYCKNKPYPKSRFCRGVPDPKIXYLRFG 155
P RCYR KNKPYPKSR+CRGVPDPKI G
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVG 344
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 524 PDVKRSTYQKKWGFTKYERDEFEKLREEGRLANDG 628
P +R + KWGFT+++RDE+ KL+ EGR+ DG
Sbjct: 467 PGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDG 501
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 208 bits (508), Expect = 3e-54
Identities = 98/147 (66%), Positives = 115/147 (78%)
Frame = +1
Query: 130 PRSXIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIR 309
P+ I+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K+ GKD FH+R
Sbjct: 25 PKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLR 84
Query: 310 MRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQV 489
+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR
Sbjct: 85 VRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHA 144
Query: 490 IEALRRAKFKFPGRQKIYVSKEVGFHK 570
EALRRAKFKFPGRQKI S++ GF K
Sbjct: 145 SEALRRAKFKFPGRQKIIESRKWGFTK 171
Score = 54.8 bits (126), Expect = 6e-08
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 66 CYRYCKNKPYPKSRFCRGVPDPKI 137
CYR KNKPYPKSR+CRGVPDPKI
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKI 27
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 524 PDVKRSTYQKKWGFTKYERDEFEKLREEGRLANDG 628
P ++ +KWGFTK+ RDE+ +L+ EGR+ DG
Sbjct: 156 PGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 449 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 357
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 147 EDTGSWDQVHPDRTSISDTVYFCSTG 70
ED GSW H D +++ DT+ CS+G
Sbjct: 771 EDLGSWGH-HSDPSTVPDTILQCSSG 795
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 184 PLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 288
P C +HL SD Y S E ++AG+ C L K G
Sbjct: 592 PRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>01_05_0078 + 17931998-17932062,17933320-17933416,17933506-17933601,
17933957-17933988,17935143-17935595,17935831-17935975,
17936058-17936159,17937798-17937890,17939448-17939489,
17940092-17940202,17940446-17940517,17940596-17940714,
17940981-17941044,17941133-17942782
Length = 1046
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = -1
Query: 283 SSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYXILGSGTPR 113
S+ R + Y L P S+V + P R + YP R+ G G PR
Sbjct: 989 SAQRSSVMDMYALVPSASGSSVMDKYAPPLEDTNYSARGVPQYPYRQLGSSGGGWPR 1045
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 403 GKPQGTVARVRIGQPIMSVRSSD 471
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>04_01_0289 +
3830052-3831134,3831141-3831230,3831494-3831525,
3833690-3834623
Length = 712
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 169 NVDDFPLCVHLVSDEYEQLSSEALEAGR-ICC 261
NV++ P + L+ DE +++ E L AGR I C
Sbjct: 679 NVEEIPTSMDLMKDENDKIQLEILTAGRNIAC 710
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 275 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 174
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 403 GKPQGTVARVRIGQPIMSVRSSD 471
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>08_02_0567 + 18769742-18769790,18769928-18771351
Length = 490
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +1
Query: 388 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 540
MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++
Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76
>06_03_0804 + 24761974-24763196,24763674-24764019
Length = 522
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 488 SSRLCAVPSSSSPDVKRSTYQKKWGFTK 571
SSRLCA +PD + Y +WGF K
Sbjct: 391 SSRLCA----RNPDEPETDYSNEWGFEK 414
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 352 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 480
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>05_01_0592 +
5332067-5332233,5332326-5332488,5332572-5332642,
5333311-5333420,5333457-5333528,5333599-5333634,
5333635-5334071
Length = 351
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 233 SELSCSYSSDTKCTHSGKSSTFALFLPKSKIXDLG 129
+E CS+ C SGKSS P KI ++G
Sbjct: 191 TEFDCSFEYCVHCICSGKSSVHVRDEPTGKIYEVG 225
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 476 GRHRSSRLCAVPSSSSPDVKRSTYQKKWGF 565
G+ RSSRL PS+ D KR ++ W F
Sbjct: 813 GKKRSSRLPEAPSNMFDDSKRGLPKEGWTF 842
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,460,636
Number of Sequences: 37544
Number of extensions: 477255
Number of successful extensions: 1351
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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