Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_H19
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 215 3e-56
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 5.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 5.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 5.0
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.6
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 28 6.6
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81514-2|CAB04189.1| 283|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 215 bits (524), Expect = 3e-56
Identities = 102/143 (71%), Positives = 114/143 (79%)
Frame = +1
Query: 142 IFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 321
IFDLG KRANVD FP CVH++S+E E LSSEALEA RIC NKY+VKNCGKD FH+R+R H
Sbjct: 33 IFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKH 92
Query: 322 PFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEAL 501
PFHV RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG + S+R + IEA
Sbjct: 93 PFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAF 152
Query: 502 RRAKFKFPGRQKIYVSKEVGFHK 570
RRAKFKFPGRQ I S++ GF K
Sbjct: 153 RRAKFKFPGRQIIVSSRKWGFTK 175
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/37 (81%), Positives = 30/37 (81%)
Frame = +3
Query: 45 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIXYLRFG 155
MGRRPARCYRY KNKPYPKSRFCRGVPD KI G
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLG 37
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = +2
Query: 551 KKWGFTKYERDEFEKLREEGRLANDGCIVQ 640
+KWGFTK++R+++E++R EGRL +DG VQ
Sbjct: 169 RKWGFTKWDREDYERMRAEGRLRSDGVGVQ 198
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 480 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 358
+P VT A + LSN T ST LA T +L P+S A
Sbjct: 46 VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86
>Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical
protein K05C4.3 protein.
Length = 536
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 306 DMELILSAVLYEVLIAADTSCLQSL*AQLFIFVGHQVHAQWKVVNVRSLLTQIEDTGS 133
D++L ++ + +E + + CL SL F FV K +N+ +L I + GS
Sbjct: 66 DVDLKMNLIHHESMKMTKSHCLDSLALGSFAFVHRDYFCGIKRINIVGILNDILNKGS 123
>Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical
protein F01G10.1 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 391 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 537
R GKP +A+ G+ I + + D W + + + K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 410 GLPNAPRIPVWSLSAPA 360
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 158 LPKSKIXDLGIRYTPTEPRFRIRFIFAVPVA 66
L ++ I D+ + TP +P+ +F+F VPVA
Sbjct: 598 LIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 158 LPKSKIXDLGIRYTPTEPRFRIRFIFAVPVA 66
L ++ I D+ + TP +P+ +F+F VPVA
Sbjct: 598 LIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 158 LPKSKIXDLGIRYTPTEPRFRIRFIFAVPVA 66
L ++ I D+ + TP +P+ +F+F VPVA
Sbjct: 181 LIETAISDILLHRTPIDPQADYKFVFEVPVA 211
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 563 FTKYERDEFEKLREEGRLANDGCIVQYR 646
F K +RDEFE++R + LA + I Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 35 KDHHGAPASEMLPVLQK*TVSEIEVLSGCT*SQDPVSSIWVRRERTLTTFHCACTWCPTN 214
K G+P+S+ P+ E + G +D W RR+ L ++ AC+WC N
Sbjct: 306 KKDTGSPSSKNAPLFSPSKWGEKRIAVGVKKMEDA----WKRRD--LELYNEACSWCEKN 359
Query: 215 MN 220
++
Sbjct: 360 LS 361
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 284 QFFTRYLLQQIRPA--SKASELSCSYSSDTKCTHSGKSSTFALFLPKSKIXDLGIRYTPT 111
+FF +L Q+IR A S S S S SS + S SS+++ + P Y+P+
Sbjct: 214 EFFRYFLTQRIRHARDSSGSHESYSGSSSSSSYSSSDSSSYSSYTPSISSNSDYTSYSPS 273
>Z81514-2|CAB04189.1| 283|Caenorhabditis elegans Hypothetical
protein F26F2.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -1
Query: 241 PKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYXILGSGTPRQNLD 101
P P + I + A+ V+ + R S+ R I+G TP Q+++
Sbjct: 119 PYPTGVCLKIPYSAKAKNVQIKMRRSKSHNYREADIVGLNTPNQHIE 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,518,281
Number of Sequences: 27780
Number of extensions: 375041
Number of successful extensions: 1062
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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