Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_H12
(447 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 93 9e-20
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 93 1e-19
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 56 2e-08
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 32 0.24
12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525 30 0.74
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 30 0.97
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830... 29 1.3
09_02_0570 + 10786779-10787144,10787353-10787547,10787647-107878... 29 1.7
03_01_0131 - 1013982-1016246 29 2.3
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539... 29 2.3
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 28 3.9
07_03_1000 - 23220878-23221821,23222164-23223001 27 5.2
06_03_0015 + 15431648-15431796,15431878-15432061,15435370-154354... 27 5.2
02_03_0349 + 18010414-18014283 27 5.2
12_01_0864 - 8205371-8205913,8206304-8206452,8206677-8206737,820... 27 6.9
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 27 6.9
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 27 9.1
07_01_0463 + 3502708-3503535 27 9.1
01_06_1624 + 38725452-38725537,38725823-38725844,38726194-38728038 27 9.1
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 93.1 bits (221), Expect = 9e-20
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +1
Query: 148 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 327
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L ++GLI+ V H
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDLMDRGLIRMVSVH 96
Query: 328 HGQVIYTRAT 357
Q IYTRAT
Sbjct: 97 CSQQIYTRAT 106
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +1
Query: 148 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 327
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V H
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVH 96
Query: 328 HGQVIYTRAT 357
Q IYTRAT
Sbjct: 97 SSQQIYTRAT 106
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 148 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 252
+NN VLFDK TY+KL EVP+YK ITP+V+SERL+
Sbjct: 971 VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 253 VRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 357
+ GSLAR+A+ +L +G I+ V H Q+IYTRAT
Sbjct: 1090 INGSLARQAIKDLESRGAIRVVSVHSSQLIYTRAT 1124
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 220 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 366
+TPAV E+ + + AR+ L + RE I+ +QH+ Q+++ +K D
Sbjct: 613 LTPAVYLEQHRFKLEKARQRLTDHRECQNIEATIQHNQQLVHVEKSKLD 661
>12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525
Length = 212
Score = 30.3 bits (65), Expect = 0.74
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 220 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 366
ITPAV E+ + + A++ L + RE+ I+ +Q + Q++Y +K D
Sbjct: 116 ITPAVYLEQHQFKLERAKQRLADRRERMDIEATIQANRQLVYEEKSKLD 164
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 29.9 bits (64), Expect = 0.97
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 217 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 366
++TPA E+ + + A++ L+E RE+ I+ +Q + Q+++ +K D
Sbjct: 167 VLTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLVHEEKSKLD 216
>11_04_0025 +
12382485-12382823,12382835-12382894,12382960-12383073,
12383187-12383837
Length = 387
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +1
Query: 217 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 366
+ITPA+ E+ + + A++ + + RE+ +I+ +Q + Q+++ K D
Sbjct: 237 IITPAIYLEQHQFKLEKAQQRIADRRERKVIEATIQANRQLVHEEKAKLD 286
>09_02_0570 +
10786779-10787144,10787353-10787547,10787647-10787826,
10787925-10788119,10789629-10789727,10789822-10790328,
10790438-10790779
Length = 627
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 14 SKMPAQEGREGFGQTASKNTEEEGRIXVAAKPRR 115
SKMPA++ +E A + ++E R+ AKP +
Sbjct: 408 SKMPAKQAKEAPAPQAEVSPKDESRVKAIAKPSK 441
>03_01_0131 - 1013982-1016246
Length = 754
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 177 GFIKQHLVVQ-LVTNFSFGPLLLLGFAATXILPSSSVFFEAVWPKPSRPSWAGIFELES 4
GF+ HL + FG +++G T ILPS F +A P P + W G E ++
Sbjct: 119 GFLGLHLGNDGFWSRSGFGRGVVIGLLDTGILPSHPSFGDAGMPPPPK-KWKGTCEFKA 176
>02_02_0584 -
11853149-11853573,11853673-11853787,11853868-11853981,
11854049-11854108,11854265-11854600,11854681-11854724,
11854776-11855507,11855736-11855921,11856012-11856153,
11856250-11856300
Length = 734
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 217 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 366
++TPAV E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 599 ILTPAVYLEQHQFKLKKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 648
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 314 CLMRPFSLSSMSALLAREPRTFNL 243
C +RP S +++ AL+AR PR L
Sbjct: 217 CYVRPVSFAALEALVARSPRLTRL 240
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 120 LLLLGFAATXILPS--SSVFFEAVWPKPSRPSWA 25
LLLL F + LP+ + VWPKP+ SWA
Sbjct: 12 LLLLSFLLSSPLPARCDAPLPVNVWPKPTSMSWA 45
>06_03_0015 +
15431648-15431796,15431878-15432061,15435370-15435455,
15436863-15436957,15437614-15437689,15438073-15438185,
15439849-15439955,15440227-15440400,15440691-15440915
Length = 402
Score = 27.5 bits (58), Expect = 5.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -3
Query: 214 CTVGLPCTVSHMWVYQTTPGCSTCH---ELF-LWTTSSSWLCRHXDPSFFFCVF*GCLAE 47
C V + + +W + PG + LF L T SS L R PSFF C + L++
Sbjct: 134 CLVAVEGGNTMLWHDRWLPGRTIAELAPNLFELITQRSSCLPRMASPSFFVCGYASPLSD 193
Query: 46 AFASF 32
+ SF
Sbjct: 194 EYVSF 198
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 172 KPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRE 297
KPT E+L K +PQ K++ AV E + + L +LR+
Sbjct: 39 KPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRD 80
>12_01_0864 -
8205371-8205913,8206304-8206452,8206677-8206737,
8206815-8206917,8207197-8207492
Length = 383
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 217 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 366
++TP V E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 280 ILTPGVYLEQHQFKLEKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 329
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 253 VRGSLARRALIELREKGLIKQVVQHHGQVIYT 348
+RG +RAL +R+ G I++VVQ+ Q Y+
Sbjct: 239 IRGIGGQRALKLIRQHGYIEEVVQNLSQTRYS 270
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 396 NLYHSLCDWIIALGRTRVDHLPMMLDYLF 310
NL+H++ DW A +RV LP + +F
Sbjct: 347 NLFHTITDWYSAYVSSRVTDLPNRPNVVF 375
>07_01_0463 + 3502708-3503535
Length = 275
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 30 KKDAKASAKQPQKTQKKKEGSXWRQSQEEE 119
KK+ + K+ K+ KK+EG + EEE
Sbjct: 104 KKEKEMKEKKKDKSDKKEEGKKKKDGDEEE 133
>01_06_1624 + 38725452-38725537,38725823-38725844,38726194-38728038
Length = 650
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 296 SLSSMSALLAREPRTFNLSDTTAGV---ISLYCGT 201
S S + R+P ++NL D TAG + L CG+
Sbjct: 173 SCSCLKGFSIRDPNSWNLGDQTAGCRRNVMLQCGS 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,793,141
Number of Sequences: 37544
Number of extensions: 212360
Number of successful extensions: 637
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -