Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_H11
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 161 1e-39
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 161 1e-39
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 161 1e-39
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 161 1e-39
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 161 1e-39
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 161 1e-39
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 155 6e-38
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 140 2e-33
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 135 5e-32
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 69 9e-12
AJ583818-1|CAE47745.2| 339|Homo sapiens ubiquitin specific prot... 25 3.9
BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 2... 29 8.7
AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens ... 29 8.7
AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier p... 29 8.7
AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier p... 29 8.7
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 161 bits (390), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 161 bits (390), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 161 bits (390), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 161 bits (390), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 161 bits (390), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 161 bits (390), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 155 bits (376), Expect = 6e-38
Identities = 68/82 (82%), Positives = 73/82 (89%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 220 LCQPTGGRARLTEGCSFRRKQH 285
LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 140 bits (339), Expect = 2e-33
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 219
LA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 19 LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 78
Query: 220 LCQPTGGRARLTEGCSF 270
LCQPTGG+ARLTEG SF
Sbjct: 79 LCQPTGGKARLTEGISF 95
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 135 bits (327), Expect = 5e-32
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1
Query: 49 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 228
DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ
Sbjct: 1 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60
Query: 229 PTGGRARLT 255
PTGG+ARLT
Sbjct: 61 PTGGKARLT 69
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 68.5 bits (160), Expect = 9e-12
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +1
Query: 40 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 150
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>AJ583818-1|CAE47745.2| 339|Homo sapiens ubiquitin specific
proteinase 50 protein.
Length = 339
Score = 25.4 bits (53), Expect(2) = 3.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 107 CHILTLISWMLSALAVTRLQQFLV 178
C IL L+ + L+ +T LQ+FL+
Sbjct: 63 CSILPLVEYFLTGKYITALQKFLL 86
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 26 CNHAXSQLICCILPL 70
C +A SQ +C ILPL
Sbjct: 54 CVNAISQCLCSILPL 68
>BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 25
(mitochondrial carrier; dicarboxylate transporter), me
protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 154 YKITTVFSHAQRVVVCAGCSTILCQP 231
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ90768 fis, clone THYRO1000795, highly similar to
Mitochondrial dicarboxylate carrier. ).
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 154 YKITTVFSHAQRVVVCAGCSTILCQP 231
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 154 YKITTVFSHAQRVVVCAGCSTILCQP 231
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 154 YKITTVFSHAQRVVVCAGCSTILCQP 231
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,674,281
Number of Sequences: 237096
Number of extensions: 1215795
Number of successful extensions: 2059
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2059
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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