Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_H10
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4... 90 7e-18
BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4... 90 7e-18
BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4... 90 7e-18
AF132958-1|AAD27733.1| 241|Homo sapiens CGI-24 protein protein. 53 1e-06
BC015802-1|AAH15802.1| 243|Homo sapiens RWD domain containing 1... 51 3e-06
AL121953-5|CAC14427.1| 243|Homo sapiens RWD domain containing 1... 51 3e-06
AC093081-1|AAQ96848.1| 125|Homo sapiens unknown protein. 41 0.003
>BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 89.8 bits (213), Expect = 7e-18
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +1
Query: 226 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 399
E Q E+E L+SIYEGD++F+++ ++QY+ + GD K+F++EISW YP P ++
Sbjct: 5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64
Query: 400 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 543
F+N + + VK++IL+ L E LG AMTYTLFE ++ + +
Sbjct: 65 NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFM 112
>BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 89.8 bits (213), Expect = 7e-18
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +1
Query: 226 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 399
E Q E+E L+SIYEGD++F+++ ++QY+ + GD K+F++EISW YP P ++
Sbjct: 5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64
Query: 400 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 543
F+N + + VK++IL+ L E LG AMTYTLFE ++ + +
Sbjct: 65 NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFM 112
>BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 89.8 bits (213), Expect = 7e-18
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +1
Query: 226 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 399
E Q E+E L+SIYEGD++F+++ ++QY+ + GD K+F++EISW YP P ++
Sbjct: 5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64
Query: 400 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 543
F+N + + VK++IL+ L E LG AMTYTLFE ++ + +
Sbjct: 65 NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFM 112
>AF132958-1|AAD27733.1| 241|Homo sapiens CGI-24 protein protein.
Length = 241
Score = 52.8 bits (121), Expect = 1e-06
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Frame = +1
Query: 211 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 366
M+D E+Q E+E L+SIY D+F + T + + D++ L+ ++
Sbjct: 1 MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58
Query: 367 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILA 546
KYP E P + EIF ++L +IL +L +AE+ LG M +TL ++E+++EI
Sbjct: 59 KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEI-- 114
Query: 547 GQVEEVVSTRGRKNR 591
V+++ RKN+
Sbjct: 115 --VDQIKLEERRKNK 127
>BC015802-1|AAH15802.1| 243|Homo sapiens RWD domain containing 1
protein.
Length = 243
Score = 51.2 bits (117), Expect = 3e-06
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Frame = +1
Query: 211 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 366
M+D E+Q E+E L+SIY D+F + T + + D++ L+ ++
Sbjct: 1 MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58
Query: 367 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 543
KYP E P + EIF ++L +IL +L +AE+ LG M +TL ++E+++EI+
Sbjct: 59 KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115
>AL121953-5|CAC14427.1| 243|Homo sapiens RWD domain containing 1
protein.
Length = 243
Score = 51.2 bits (117), Expect = 3e-06
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Frame = +1
Query: 211 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 366
M+D E+Q E+E L+SIY D+F + T + + D++ L+ ++
Sbjct: 1 MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58
Query: 367 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 543
KYP E P + EIF ++L +IL +L +AE+ LG M +TL ++E+++EI+
Sbjct: 59 KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115
>AC093081-1|AAQ96848.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 397 LEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 543
+ F+N + + VK++IL+ L AE LG AMTYTLFE ++ + +
Sbjct: 1 MNAFFNNTISSAVKQSILAKLQEAAEANLGTAMTYTLFEYAKDNKEQFM 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,112,047
Number of Sequences: 237096
Number of extensions: 1792909
Number of successful extensions: 4524
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4518
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -