Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_H10
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   1.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.9  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 574 WWTRPPRPGQPVSR 533
           WW+RP  P Q  S+
Sbjct: 45  WWSRPREPAQTTSK 58


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 208  IMSDEAEQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKY-MDGDKSFILEISWGLKY 372
            +  ++A Q+ EE E++  IY+  D F  + +  +     +DG++  +L+ S   +Y
Sbjct: 1538 VSRNKAYQKVEENEIIFEIYKMGDRFIGLTSDKFDVSLALDGER-VMLKASEDYRY 1592


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 199 FFFCLILARAACAFATKQNKSLG 131
           FF   ++  AAC F+      LG
Sbjct: 457 FFLATVVEEAACRFSAVAQAQLG 479


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,832
Number of Sequences: 438
Number of extensions: 3872
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)