Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_H07
         (411 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    20   9.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   9.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   9.5  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -1

Query: 168 ASSVIINDFKLSDVTVLHHH 109
           A+  +++ F++ +VT++ HH
Sbjct: 344 ANVAVLHSFQMKNVTIVDHH 363


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 246 ILKDGLICSPHDSL 287
           +L DGL+C   DS+
Sbjct: 70  LLSDGLMCVEKDSI 83


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 201 QVWCHFTSXLMFPSTILKDGLICSPH 278
           Q W  +   L FPS    DG+    H
Sbjct: 334 QQWNSYWGILGFPSAPTIDGIFLPKH 359


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 201 QVWCHFTSXLMFPSTILKDGLICSPH 278
           Q W  +   L FPS    DG+    H
Sbjct: 334 QQWNSYWGILGFPSAPTIDGIFLPKH 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,426
Number of Sequences: 438
Number of extensions: 1759
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)