Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_H02
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70718-11|CAA94680.1|  590|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z68301-10|CAA92629.1|  590|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z70718-11|CAA94680.1|  590|Caenorhabditis elegans Hypothetical
           protein W01B6.9 protein.
          Length = 590

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 16  NQTDCARDLF*NTFANGRKL-NLIQKY*CTSIPSEK*IICSRGRMKYIALLTILI--ISQ 186
           N +   RD+      NG K+ N + +Y  +  PSE+ I+  RG+  +IA   ++   +S+
Sbjct: 57  NSSVAPRDVKSLVSLNGSKIYNFLVEYESSDAPSEQLIMKPRGKNDFIACFELIYQHLSK 116

Query: 187 VYSAPQ 204
            Y  P+
Sbjct: 117 DYEFPR 122


>Z68301-10|CAA92629.1|  590|Caenorhabditis elegans Hypothetical
           protein W01B6.9 protein.
          Length = 590

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 16  NQTDCARDLF*NTFANGRKL-NLIQKY*CTSIPSEK*IICSRGRMKYIALLTILI--ISQ 186
           N +   RD+      NG K+ N + +Y  +  PSE+ I+  RG+  +IA   ++   +S+
Sbjct: 57  NSSVAPRDVKSLVSLNGSKIYNFLVEYESSDAPSEQLIMKPRGKNDFIACFELIYQHLSK 116

Query: 187 VYSAPQ 204
            Y  P+
Sbjct: 117 DYEFPR 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,959,404
Number of Sequences: 27780
Number of extensions: 152361
Number of successful extensions: 375
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)