Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_G19
(591 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 162 4e-41
SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase |Schizo... 31 0.17
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 26 3.6
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 25 6.2
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 25 6.2
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 6.2
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 25 6.2
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 25 8.3
SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit Ssr2|Schizosa... 25 8.3
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 8.3
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 25 8.3
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 162 bits (393), Expect = 4e-41
Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
Frame = +2
Query: 101 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 280
EV I SAVRTPM + A+ER I ++ EV++GNV SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 281 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 460
Q PARQ + AGLP+S +CTTVNKVCASGMK+ +L AQ + TG +I++AGG ESMSN P
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 461 FYLKRGE--TSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKK 589
+Y + YG ++LVDG++ DGL+D Y+ MGN AE A++
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEE 169
>SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 341 TVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSN 454
T CA+G +I A ++ G D+I+AGG ES N
Sbjct: 165 TTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCIN 202
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 301 CNICRFAKKYHMYNCKQSMC 360
CN+C + KY NC S C
Sbjct: 102 CNVCGYWGKYACQNCGTSYC 121
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 38 NIKMKPIFTAMAAFSTKVSLNEVVIASAV 124
N K F +AFST +SLN+ ++ S +
Sbjct: 256 NFKCLDAFDLRSAFSTYLSLNQPMVVSVI 284
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 114 HQQLELLWVLS-EGAYLVYQHQNWALSLLTRQSKE 215
HQ +E W+ S EG L Y ++LSL KE
Sbjct: 125 HQDIE--WITSTEGTVLYYDQSTFSLSLFYPDGKE 157
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 253 WQCLFCKFGPSTCKTSCNICRFAKKYHM 336
W C C F +TSC C F H+
Sbjct: 347 WNCPMCGFSNFQRRTSCFRCSFPGPTHV 374
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 376 RFHARGTYFVYSCTYGTF 323
RF R Y +YSC YG+F
Sbjct: 467 RFLRRLLYHLYSCQYGSF 484
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 311 AGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 463
AG P I T V K + + +A + GA+ IILAGG ++++ + +
Sbjct: 154 AGCPHVVISTPVRKDGTVAPEIVYIANK---IGAEAIILAGGAQAIAAMAY 201
>SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit
Ssr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 503
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 210 SIAALTATAPNSDADKLDKLPRKEPI 133
S+ A+ T+P + +K DK+PR + +
Sbjct: 167 SLNAMEQTSPKEEDEKSDKVPRVDKV 192
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 207 IAALTATAPNSDADKLDKL 151
+AA+ ATAP ++DKLD L
Sbjct: 354 LAAIHATAPAYESDKLDYL 372
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 96 RETLVENAAIAVNIGFILMLIILFPFK 16
RE +AAI VN G + + L PFK
Sbjct: 209 REPYKNSAAINVNTGTVTHFVALAPFK 235
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,464,431
Number of Sequences: 5004
Number of extensions: 51049
Number of successful extensions: 167
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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