Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_G16
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 85 6e-17
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 79 4e-15
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 79 4e-15
04_04_1523 - 34148407-34150224 31 1.1
01_06_0633 - 30741716-30742432 30 1.4
06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725... 30 1.9
01_06_0852 + 32463784-32463834,32463957-32464628,32465515-324656... 30 1.9
04_03_0755 + 19310648-19311603,19312420-19312633 29 2.4
01_06_1111 - 34599014-34599215,34599378-34599497,34599654-345997... 29 3.2
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 29 4.3
04_01_0180 + 2034021-2034023,2034741-2035088 28 5.6
01_01_1174 + 9348256-9349734 28 5.6
04_01_0262 + 3528083-3528370 28 7.5
05_01_0130 + 878323-878640,879017-879181 27 9.9
04_03_1022 - 21778315-21779007 27 9.9
02_04_0525 - 23672984-23673085,23673315-23673419,23673820-236739... 27 9.9
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +1
Query: 130 RSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 309
RSE+M QL + +E+A V+ LGELGL+QF+DLN D + FQR FVN+V+RC EM RKL
Sbjct: 14 RSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSPFQRIFVNQVKRCSEMSRKL 73
Query: 310 RYLEKEIRRDGIPMLEIPGECPE 378
R+ +I + G+ P P+
Sbjct: 74 RFFNDQINKAGVKSSVRPAMQPD 96
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 404 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRK 520
+LEA + EN+L E+N N+E L + Y EL E K +L K
Sbjct: 101 ELEAKLREHENDLLEMNTNSEKLLQTYNELLEFKMVLSK 139
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = +1
Query: 124 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 303
L RSE M L Q+ + +E+A+ VS LG+LGL+QF+DLN D + FQR + ++++RC EM R
Sbjct: 14 LMRSEAMQLVQVIIPAESAHLAVSYLGDLGLLQFKDLNADKSPFQRTYASQIKRCGEMAR 73
Query: 304 KLRYLEKEIRRDGI 345
KLR+ +++ + I
Sbjct: 74 KLRFFREQMSKAAI 87
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2
Query: 404 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQV 529
DLE +LE EL EVN N + L+R Y EL E +L+K V
Sbjct: 102 DLEVKLGELEVELTEVNANNDKLQRTYNELVEYNIVLQKEMV 143
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/74 (47%), Positives = 53/74 (71%)
Frame = +1
Query: 124 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 303
L RSE M L Q+ + +E+A+ VS LGELGL+Q +DLN D + FQR + +++RC EM R
Sbjct: 15 LMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSPFQRTYAAQIKRCGEMAR 74
Query: 304 KLRYLEKEIRRDGI 345
KLR+ ++++ + GI
Sbjct: 75 KLRFFKEQMSKAGI 88
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +2
Query: 404 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQVFF 535
DLE +LE EL EVN N E LKR Y EL E +L+K FF
Sbjct: 103 DLEIKLGELEAELAEVNANNEKLKRTYNELLEYSTVLQKAGEFF 146
>04_04_1523 - 34148407-34150224
Length = 605
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 142 MTLCQLFLQSEAAYA-CVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYL 318
+ LC +FL+ AA C++E+GE+ +FR L + + + + R+ E E +
Sbjct: 393 LVLCTIFLKEAAASGLCLAEIGEMMTREFRGLEEEPSKLEVVCMEARRKLAEWEPYSPVI 452
Query: 319 EKEIRRDGIPMLEIPGE 369
E+ D L++ GE
Sbjct: 453 EQGEDMDFQFSLDMLGE 469
>01_06_0633 - 30741716-30742432
Length = 238
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 TPSNVSSSMRYVAAMRWNVSSVTWRRRSDVTGSPCW--RSPESVPRRLNPGXMIDLEATF 421
+PS+ SS+R AA W+ SSV S+ P R +PRRL+ + LE +
Sbjct: 132 SPSSPRSSLRVAAAPGWSPSSVLGLGASNKLRLPSLGRRCGRVLPRRLSCKCLTFLEPLY 191
Query: 422 EKL 430
+K+
Sbjct: 192 QKM 194
>06_03_0852 -
25371461-25371783,25372080-25372159,25372472-25372554,
25372597-25372740,25372836-25372946,25373238-25373354,
25373436-25373562,25374160-25374296
Length = 373
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 339 VTSDLLLQVTELTFHLIAATYLIDELTLEGVY 244
V ++L +TE +H IA+ Y DELT GV+
Sbjct: 4 VHTELFFPLTEAEYHGIASYYFQDELTNAGVF 35
>01_06_0852 +
32463784-32463834,32463957-32464628,32465515-32465627,
32465999-32466261,32466803-32466924,32467176-32467253,
32467353-32467409,32467590-32467658,32467903-32467947,
32468303-32468398
Length = 521
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 359 SPESVPRRLNPGXMIDLEATFEKLENELREVNQN 460
+PE VP + G MI E + +L E+ ++NQ+
Sbjct: 398 TPEVVPYLMEHGIMITKEELYARLNEEMEDINQD 431
>04_03_0755 + 19310648-19311603,19312420-19312633
Length = 389
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 256 GRRLRQDSNLGTELAPTPRARTRRHKQLHFAGKADIVSSPHSETKTP 116
G RL D T LAP+P ++ + + F G A V+ P S P
Sbjct: 128 GPRLAIDQQPSTILAPSPTTTLQKQQGIGFGGAAAAVAPPPSPRGMP 174
>01_06_1111 -
34599014-34599215,34599378-34599497,34599654-34599760,
34600452-34600480,34600768-34600982,34601215-34601330,
34601960-34602218,34602342-34602429,34602932-34603003,
34603080-34603155,34603579-34603637,34603937-34604000,
34604104-34604232
Length = 511
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 276 LIDELTLEGVYVRIQISELN*PQLPELGHAGISSFTLQEKLT 151
+IDELT G+ V + + L+ PQ E +AG S + E T
Sbjct: 126 IIDELTKRGIQVHVMLYHLDLPQALEDEYAGWLSPRIVEDFT 167
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 404 DLEATFEKLENELREVNQNAEA 469
DLEA E LENEL+E ++ EA
Sbjct: 604 DLEANVESLENELQEQSKRLEA 625
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 326 RSDVTGSPCWRSPESVPRRLNPGXMIDLEATFEKLENELREVNQNAEALKRNYLELTELK 505
R TG P + E + + L KL + ++E+N EAL+R LT K
Sbjct: 6 RRGYTGDPPTKVLERENADAHKDQVKGLNGRISKLNDTIKELNDTIEALERQVQNLTRYK 65
Query: 506 HILRK 520
+K
Sbjct: 66 EEKQK 70
>01_01_1174 + 9348256-9349734
Length = 492
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 142 MTLCQLFLQ-SEAAYACVSELGELGLVQFRDLNPDVNAFQ 258
+TLC +FLQ + AA C++++G++ +F + ++A +
Sbjct: 333 LTLCTIFLQRAAAAGLCLADIGDMMTREFSAMEEGLSALE 372
>04_01_0262 + 3528083-3528370
Length = 95
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 437 ELREVNQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALISDDPN-RHM 613
E RE+ +AL + L E L + V +HE ES+T+ D P+ R
Sbjct: 2 ENRELKMQNKALSKQNKVLMEQSRELMELPVLRQKHEELTRRYESLTKKRNEDQPSLRRS 61
Query: 614 GHVQLGLRDKQ 646
G ++ D+Q
Sbjct: 62 GKLKKEKEDQQ 72
>05_01_0130 + 878323-878640,879017-879181
Length = 160
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 390 GLRRLGTLSGDLQHGDPVTSD 328
G+R+L + S QH DP TSD
Sbjct: 35 GMRQLKSASSSSQHDDPATSD 55
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 397 LPWVEAPRDTLRGSPAWGSRHV*SPSPGNGAYVPSHRSDVPH 272
LP AP+ P + H +P+P G Y+P H H
Sbjct: 53 LPPSPAPQQWYDHPPNYHPPHTPAPAPAPGPYIPPHHPHHHH 94
>02_04_0525 -
23672984-23673085,23673315-23673419,23673820-23673979,
23674085-23674162,23674383-23674524,23674641-23674785,
23674888-23674950,23675042-23675101,23675364-23675441,
23675524-23675598,23675744-23675860,23675960-23676190,
23676300-23676419,23676512-23676588,23676669-23676769,
23676844-23676950,23677094-23677251,23677383-23677599
Length = 711
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 380 RLNPGXMIDLEATFEKLENELREVNQNAEALKRNYLELTE 499
R+NPG D A FE+LE + + E +++ + L E
Sbjct: 188 RVNPGNFADRRAQFEQLEYTEDDYQKELEHIEKVFSPLVE 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,537,960
Number of Sequences: 37544
Number of extensions: 315119
Number of successful extensions: 908
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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