Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_G12
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.2  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   4.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 148 AVEKHVEKHNTEGDNDSGVDESTQGNDLNGSPSS 249
           AV++  ++H        G  +S  G  +N SPSS
Sbjct: 788 AVQQSQQRHQHAAQMIYGHQQSHHGLHINSSPSS 821


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 193 DSGVDESTQGNDLNGSPSSPNKKI 264
           DSG+DE  + +  NG     N+K+
Sbjct: 36  DSGIDEKKEDDFRNGIIDVENEKV 59


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -2

Query: 213 RFVNSAVVISLCVMFFHVLLDSNSV 139
           +F+N+A  +S C M  +  ++  S+
Sbjct: 562 QFLNTAATLSFCEMIHNAQVNKRSI 586


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 172 HNTEGDNDSGVDESTQGNDLNG 237
           +N  G ND+G       N+ NG
Sbjct: 249 NNNNGANDNGNGNGASNNNNNG 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.128    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,934
Number of Sequences: 438
Number of extensions: 3402
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)