Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_G08
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    26   0.37 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   4.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.0  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 11/69 (15%), Positives = 36/69 (52%)
 Frame = +3

Query: 66  LCTKVFLCKSNIKIYIKMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYH 245
           +C +V+   ++++ +  +  + + + E    E+EQMR       E    ++ ++++ +  
Sbjct: 37  ICKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQREHSDRVTSQQQQQQQQ 96

Query: 246 IQRRVKQKE 272
            Q++ +Q++
Sbjct: 97  QQQQDQQQQ 105


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = -3

Query: 241  YSNSFRFWDISFISSSVYKFVL--LIC 167
            Y   F  WD + ISS+V K+ L  L+C
Sbjct: 1403 YKPEFGDWDTAQISSTVQKYTLENLLC 1429


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 522 IHGDKPQMWLMASKWESLEQNNL 590
           I G + Q W   + W SL+ +N+
Sbjct: 15  IQGTQAQHWSRGNTWLSLDNSNM 37


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 522 IHGDKPQMWLMASKWESLEQNNL 590
           I G + Q W   + W SL+ +N+
Sbjct: 15  IQGTQAQHWSRGNTWLSLDNSNM 37


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +3

Query: 204 IKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKKIQLTEK 356
           +K+I+++  E  + IQ  +++  D + Y A     +  I TR ++IQLTEK
Sbjct: 293 LKDINRQVDELNFDIQD-LERWRDRI-YEAIHTGSV--INTRGERIQLTEK 339


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 536 TSNVVDGEQMGEFRTEQSXKC 598
           T  +VDG + GEF  +   +C
Sbjct: 47  TEELVDGMRRGEFPDDHDLQC 67


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -1

Query: 174 SFAPTHLSYSQYVDLLVQPFLCISLYYFYTKTLSYKAAEL 55
           ++ P H SY   ++L  +    IS Y+ YT   + +  ++
Sbjct: 437 NWLPVHTSYKSGLNLEQEKKDSISHYHLYTNLTALRKRDV 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,693
Number of Sequences: 438
Number of extensions: 3922
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)