Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_G01
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 192 5e-50
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 140 2e-34
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 133 2e-32
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 120 2e-28
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 111 8e-26
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 107 1e-24
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 107 2e-24
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 85 6e-18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 74 2e-14
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 9.5
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 192 bits (467), Expect = 5e-50
Identities = 87/149 (58%), Positives = 111/149 (74%)
Frame = +3
Query: 171 VVIETTMGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXX 350
V ++T++GKI++E+Y +HAP TC+NF L + GYY+ FHRVI DF+IQ
Sbjct: 4 VELQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRG 63
Query: 351 XQSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQ 530
SIYG F DEI SDL H GAGILSMANAGPNTN+SQFFITLAPT WLDGKHTIFGRV
Sbjct: 64 GTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVV 123
Query: 531 NGMTVVKRIGLVECDKNDCPVDDVRIERA 617
+G++V KR+GL+ D +D P++ ++I +A
Sbjct: 124 SGLSVCKRMGLIRTDSSDRPIEPLKIIKA 152
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 140 bits (339), Expect = 2e-34
Identities = 69/145 (47%), Positives = 90/145 (62%)
Frame = +3
Query: 174 VIETTMGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXX 353
+I TT G I +++Y + AP +NF GYY+NT FHR+I++FMIQ
Sbjct: 458 IIHTTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG 517
Query: 354 QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQN 533
+SI+ F+DEI+ +LKH +SMAN+GPNTN SQFFIT T WLDGKHTIF R
Sbjct: 518 ESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYA 577
Query: 534 GMTVVKRIGLVECDKNDCPVDDVRI 608
G+ VV RI E DK D P++ +I
Sbjct: 578 GLDVVHRIEQGETDKYDRPLEPTKI 602
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 133 bits (322), Expect = 2e-32
Identities = 67/145 (46%), Positives = 87/145 (60%)
Frame = +3
Query: 177 IETTMGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQ 356
I T G+I +E++ +AP NF++L ++GYY NT FHR I FMIQ Q
Sbjct: 280 IVTNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQ 339
Query: 357 SIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNG 536
SI+G FKDE + LKH GI+SMAN G NTN SQFFI P + LD KHTIFGRV G
Sbjct: 340 SIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGG 399
Query: 537 MTVVKRIGLVECDKNDCPVDDVRIE 611
+ V+ + V + ND P +++E
Sbjct: 400 LNVLDALEKVPTNSNDHPKLPIKLE 424
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 120 bits (288), Expect = 2e-28
Identities = 63/144 (43%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
Frame = +3
Query: 189 MGKIMLEMYWKHAPLTCRNFMELV--RRGY-YNNTKFHRVIRDFMIQXXXXXXXXXXX-Q 356
+G++ + ++ K P T NF L +G+ Y + FHRVI +FMIQ +
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGK 99
Query: 357 SIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNG 536
SIYG F DE L H G+LSMANAGP++N SQFFIT T WLDG H +FG V +G
Sbjct: 100 SIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSG 158
Query: 537 MTVVKRIGLVECDKNDCPVDDVRI 608
+VK+I E D D P++DV+I
Sbjct: 159 YDIVKKISKAETDNRDKPLEDVKI 182
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 111 bits (267), Expect = 8e-26
Identities = 61/127 (48%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Frame = +3
Query: 189 MGKIMLEMYWKHAPLTCRNFMELV--RRGY-YNNTKFHRVIRDFMIQXXXXXXXXXXX-Q 356
+G+I+ +++ P T NF L +GY Y + FHRVI FM+Q +
Sbjct: 15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGK 74
Query: 357 SIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNG 536
SIYG F DE + LKH G+LSMANAGPNTN SQFFIT T WLDGKH +FG V G
Sbjct: 75 SIYGEKFPDENFA-LKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEG 133
Query: 537 MTVVKRI 557
M VVK++
Sbjct: 134 MDVVKKV 140
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 107 bits (257), Expect = 1e-24
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 171 VVIETTMGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXX 350
V+++TT G I +E++ K P CRNF++L GYY+ T HRV+ +F+IQ
Sbjct: 15 VILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMG 74
Query: 351 XQSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQ 530
+SIYG F E L+ G++ MA N SQFFITL PT +GK T+FGRV
Sbjct: 75 GESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
Query: 531 NGMTV--VKRIGLVECDKNDCPV 593
G T+ V RI +E D N PV
Sbjct: 135 -GDTIYNVVRISELELDANQRPV 156
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 107 bits (256), Expect = 2e-24
Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 9/147 (6%)
Frame = +3
Query: 198 IMLEMYWKHAPLTCRNFMELVRRGY--------YNNTKFHRVIRDFMIQXXXXXXXXXXX 353
I E++ P T +NF L G+ Y ++FHRVI++FM+Q
Sbjct: 19 IYFELFDNVVPKTVKNFASLCN-GFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTG 77
Query: 354 -QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQ 530
+SIYG F+DE +LKH +LSMANAGPNTN SQFFIT PT LDGKH +FG+V
Sbjct: 78 GESIYGEKFEDE-NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVI 136
Query: 531 NGMTVVKRIGLVECDKNDCPVDDVRIE 611
G + V+ I +E KND PV V IE
Sbjct: 137 QGKSTVRTIENLE-TKNDDPVVPVVIE 162
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 85.4 bits (202), Expect = 6e-18
Identities = 56/152 (36%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Frame = +3
Query: 189 MGKIMLEMYWKHAPLTCRNFMELVRR----------GYYNNTKFHRVIRDFMIQXXXXXX 338
+G+I + ++ P T NF + GY N+T FHR+I+ FMIQ
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST-FHRIIQGFMIQGGDFVS 76
Query: 339 XXXXXQS-IYGPH-FKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHT 512
+ I+ F DE LKH G+LSMANAG ++N QFFIT P +LDGKH
Sbjct: 77 GDGTGSATIFNSRTFPDE-NFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHV 135
Query: 513 IFGRVQNGMTVVKRIGLVECDKNDCPVDDVRI 608
+FG V G +VK I N P +V I
Sbjct: 136 VFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 73.7 bits (173), Expect = 2e-14
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Frame = +3
Query: 171 VVIETTMGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQ-XXXXXXXXX 347
V+IETT+G ++++++ K AP TC NF++L + YYN F+ + ++ Q
Sbjct: 3 VLIETTVGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 348 XXQSIYG------PHFKDEITSDLKHAGAGILSMANAGPNTN-------ASQFFITLAPT 488
+ ++ FK E L H G++SM+ A ++ SQF ITL+
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 489 -QWLDGKHTIFGRVQNGMTVVKRIGLVECDKNDCPVDDVRIERAYI 623
+ LD ++ I+G+V G + +I CD+ P D+RI+ I
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIKHTII 168
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 369 PHFKDEITSDLKHAGAGILSMANAGPNTNAS 461
P F T+ K AG G+ AG NTN +
Sbjct: 476 PAFGSTATTAPKPAGTGLFGGLGAGANTNTA 506
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,949
Number of Sequences: 5004
Number of extensions: 58472
Number of successful extensions: 124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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