Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F16
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   4.5  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   5.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.8  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 277 LLEKAGQDASEPFEDVSHSSDARSLMKKY 363
           ++++A  D  E       SSD++SL+KKY
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKY 29


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +1

Query: 331 SSDARSLMKKY 363
           SSD++SL+KKY
Sbjct: 3   SSDSKSLLKKY 13


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 404 GAGFSPQWTNEQAQEQGNWSSWLTPLLLGVAATLLYRYLFV*ATRSPDT 550
           GA    Q   +Q Q+Q    S    L++G +     RYL   AT S  T
Sbjct: 792 GARQQQQQQQQQQQQQQQQQSSSDYLMVGNSPASSPRYLSAAATSSTST 840


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 351 DEEVQDRGVGGERPRADPEPASARSGP 431
           ++EV D  +GG   R  P   +A  GP
Sbjct: 32  EKEVLDNILGGYDARIRPSGENATDGP 58


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 351 DEEVQDRGVGGERPRADPEPASARSGP 431
           ++EV D  +GG   R  P   +A  GP
Sbjct: 32  EKEVLDNILGGYDARIRPSGENATDGP 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,507
Number of Sequences: 438
Number of extensions: 3074
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)