Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F15
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071143-1|AAL48765.1|  520|Drosophila melanogaster RE17954p pro...    29   4.1  
AF433874-1|AAM18025.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433873-1|AAM18024.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433872-1|AAM18023.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433871-1|AAM18022.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433870-1|AAM18021.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433869-1|AAM18020.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433868-1|AAM18019.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433867-1|AAM18018.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433866-1|AAM18017.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF433865-1|AAM18016.1|  326|Drosophila melanogaster pleiohomeoti...    29   4.1  
AF034212-1|AAC39123.1|  520|Drosophila melanogaster transcriptio...    29   4.1  
AE014135-203|AAN06584.1|  520|Drosophila melanogaster CG17743-PB...    29   4.1  
AE014135-202|AAF59378.2|  520|Drosophila melanogaster CG17743-PA...    29   4.1  

>AY071143-1|AAL48765.1|  520|Drosophila melanogaster RE17954p
           protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 64  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 99


>AF433874-1|AAM18025.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433873-1|AAM18024.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433872-1|AAM18023.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433871-1|AAM18022.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433870-1|AAM18021.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433869-1|AAM18020.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433868-1|AAM18019.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433867-1|AAM18018.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433866-1|AAM18017.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF433865-1|AAM18016.1|  326|Drosophila melanogaster pleiohomeotic
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 17  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 52


>AF034212-1|AAC39123.1|  520|Drosophila melanogaster transcription
           factor YY1 homolog protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 64  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 99


>AE014135-203|AAN06584.1|  520|Drosophila melanogaster CG17743-PB,
           isoform B protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 64  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 99


>AE014135-202|AAF59378.2|  520|Drosophila melanogaster CG17743-PA,
           isoform A protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 243 NKETK*VFSSFKYSIKIKGNLMYKMNLNFDFSSIGYG 353
           N + K   + F   +K+  N+ Y+MN+N  F +IGYG
Sbjct: 64  NDKIKAADNIFSSKLKMNPNMSYEMNINC-FKNIGYG 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,508,872
Number of Sequences: 53049
Number of extensions: 295845
Number of successful extensions: 364
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)