BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_F12
(654 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 48 3e-07
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 26 1.2
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 2.8
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 23 6.4
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 6.4
AY062195-1|AAL58556.1| 139|Anopheles gambiae cytochrome P450 CY... 23 8.4
>AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock
protein protein.
Length = 133
Score = 47.6 bits (108), Expect = 3e-07
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 443 KLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKS-VYREYNRGVFVAQGN 598
++ DV Q++PEEI VK VDN +LV KHEEK D V R + R + +G+
Sbjct: 16 QINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPKGH 68
Score = 32.7 bits (71), Expect = 0.010
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 579 FLLPKGTNPEAIKSSLSRDGVLTV 650
++LPKG N I SSLS DG+LT+
Sbjct: 62 YMLPKGHNEADIVSSLSSDGILTI 85
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 223 HQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEH 327
+++A R R E+D +NE ++ ++Q QEH
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 24.6 bits (51), Expect = 2.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 212 EFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 310
E R + +++ E+E++ FR+EL E+N
Sbjct: 678 EMQKKRSEYSQLIQEHEKELADFRAELKQTEAN 710
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 23.4 bits (48), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 410 LIQDEGDGKTLKLRFDVSQY-TPEEIVVKTVDNKL 511
+I + +G+TLK +DV ++ T ++V K D L
Sbjct: 1 MISEGAEGQTLKELYDVFKFPTDRDLVRKAFDVSL 35
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.4 bits (48), Expect = 6.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 217 LKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEHN 330
L+HQ + + ++ ++ +Q Q H+Q +Q LQ H+
Sbjct: 1300 LQHQYQQQLQQQQQQQQQQQQQ---HQQHQQHQLQHHH 1334
>AY062195-1|AAL58556.1| 139|Anopheles gambiae cytochrome P450
CYP4H18 protein.
Length = 139
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 622 EDLMASG-FVPLGNKNSPVVFSVHRFRIRF 536
ED+ +G +P G S +F++HR R F
Sbjct: 85 EDMEINGAIIPAGTSISIKIFNIHRNRTVF 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,434
Number of Sequences: 2352
Number of extensions: 11039
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -