Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F08
         (470 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p pro...   169   2e-42
AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p pro...   169   2e-42
AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-P...   169   2e-42
AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-P...   169   2e-42
AY069511-1|AAL39656.1|  438|Drosophila melanogaster LD23157p pro...    29   2.4  
AE014296-3335|AAO41278.1|  438|Drosophila melanogaster CG5605-PG...    29   2.4  
AE014296-3334|AAN12123.1|  438|Drosophila melanogaster CG5605-PF...    29   2.4  
AE014296-3333|AAN12122.1|  438|Drosophila melanogaster CG5605-PE...    29   2.4  
AE014296-3332|AAN12121.1|  438|Drosophila melanogaster CG5605-PC...    29   2.4  
AE014296-3331|AAF51575.2|  438|Drosophila melanogaster CG5605-PB...    29   2.4  
AE014296-3330|AAF51574.2|  438|Drosophila melanogaster CG5605-PA...    29   2.4  
BT029593-1|ABL75652.1|  161|Drosophila melanogaster IP16955p pro...    27   9.7  

>AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p
           protein.
          Length = 111

 Score =  169 bits (411), Expect = 2e-42
 Identities = 79/104 (75%), Positives = 87/104 (83%)
 Frame = +3

Query: 72  RNRKRPSSQLTPALPLVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 251
           + +K+        L LVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5   KKQKKALESTNARLELVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64

Query: 252 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 383
           +LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L
Sbjct: 65  MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108



 Score = 33.5 bits (73), Expect = 0.15
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = +2

Query: 59  MVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFENSSTRQSKA 193
           MVA KKQKK +ES N+RL    + GK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLELVMKSGKYCLGYKQTLK--TLRQGKA 43


>AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p
           protein.
          Length = 111

 Score =  169 bits (411), Expect = 2e-42
 Identities = 79/104 (75%), Positives = 87/104 (83%)
 Frame = +3

Query: 72  RNRKRPSSQLTPALPLVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 251
           + +K+        L LVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5   KKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64

Query: 252 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 383
           +LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L
Sbjct: 65  MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108



 Score = 35.5 bits (78), Expect = 0.037
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 59  MVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFENSSTRQSKA 193
           MVA KKQKK +ES N+RLA   + GK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43


>AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-PB,
           isoform B protein.
          Length = 111

 Score =  169 bits (411), Expect = 2e-42
 Identities = 79/104 (75%), Positives = 87/104 (83%)
 Frame = +3

Query: 72  RNRKRPSSQLTPALPLVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 251
           + +K+        L LVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5   KKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64

Query: 252 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 383
           +LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L
Sbjct: 65  MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108



 Score = 35.5 bits (78), Expect = 0.037
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 59  MVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFENSSTRQSKA 193
           MVA KKQKK +ES N+RLA   + GK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43


>AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-PA,
           isoform A protein.
          Length = 111

 Score =  169 bits (411), Expect = 2e-42
 Identities = 79/104 (75%), Positives = 87/104 (83%)
 Frame = +3

Query: 72  RNRKRPSSQLTPALPLVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 251
           + +K+        L LVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEIEYYA
Sbjct: 5   KKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYA 64

Query: 252 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 383
           +LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L
Sbjct: 65  MLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108



 Score = 35.5 bits (78), Expect = 0.037
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 59  MVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFENSSTRQSKA 193
           MVA KKQKK +ES N+RLA   + GK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43


>AY069511-1|AAL39656.1|  438|Drosophila melanogaster LD23157p
           protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3335|AAO41278.1|  438|Drosophila melanogaster CG5605-PG,
           isoform G protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3334|AAN12123.1|  438|Drosophila melanogaster CG5605-PF,
           isoform F protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3333|AAN12122.1|  438|Drosophila melanogaster CG5605-PE,
           isoform E protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3332|AAN12121.1|  438|Drosophila melanogaster CG5605-PC,
           isoform C protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3331|AAF51575.2|  438|Drosophila melanogaster CG5605-PB,
           isoform B protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3330|AAF51574.2|  438|Drosophila melanogaster CG5605-PA,
           isoform A protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 129 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 278
           +GKYC G + TL+ L  G  + +I  +N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>BT029593-1|ABL75652.1|  161|Drosophila melanogaster IP16955p
           protein.
          Length = 161

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 407 IKSYKSXXKXKKKKXKKKK 463
           IK +K   K KKKK KKKK
Sbjct: 141 IKGFKEEKKKKKKKKKKKK 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,468,716
Number of Sequences: 53049
Number of extensions: 372146
Number of successful extensions: 1270
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)