Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F08
         (470 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical ...   161   3e-40
L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical pr...    32   0.24 
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     28   3.9  
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un...    27   6.8  
U14635-11|AAK84494.2|  500|Caenorhabditis elegans Glutamate-gate...    27   6.8  
Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical ...    27   9.0  

>AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical
           protein Y106G6H.3 protein.
          Length = 113

 Score =  161 bits (390), Expect = 3e-40
 Identities = 72/102 (70%), Positives = 87/102 (85%)
 Frame = +3

Query: 81  KRPSSQLTPALPLVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 260
           ++ +  +   L +VMK+G+Y LGYKQTLK+L  GKAKLVIIA N PPLRKSEIEYYA+LA
Sbjct: 8   QKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEIEYYAMLA 67

Query: 261 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 386
           KTGVHHY+GNNIELGTACG+ +RVCTLA+TD GDSDII ++P
Sbjct: 68  KTGVHHYNGNNIELGTACGRLFRVCTLAVTDAGDSDIILSVP 109


>L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical
           protein ZK686.1 protein.
          Length = 44

 Score = 31.9 bits (69), Expect = 0.24
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +3

Query: 117 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 212
           +VMK+G+Y L Y+Q LK+L    AKLVI  K+
Sbjct: 1   MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 35   SLAFTAPKMVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFE 166
            ++A  + KM+A K  K T+E     +   +E+  +  RI+ N E
Sbjct: 1051 TMAHLSRKMIARKNSKATVEMPRKPVGPSEEVSTLSERIKRNLE 1094


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 35   SLAFTAPKMVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFE 166
            ++A  + KM+A K  K T+E     +   +E+  +  RI+ N E
Sbjct: 1051 TMAHLSRKMIARKNSKATVEMPRKPVGPSEEVSTLSERIKRNLE 1094


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 35   SLAFTAPKMVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFE 166
            ++A  + KM+A K  K T+E     +   +E+  +  RI+ N E
Sbjct: 1051 TMAHLSRKMIARKNSKATVEMPRKPVGPSEEVSTLSERIKRNLE 1094


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 35   SLAFTAPKMVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFE 166
            ++A  + KM+A K  K T+E     +   +E+  +  RI+ N E
Sbjct: 1051 TMAHLSRKMIARKNSKATVEMPRKPVGPSEEVSTLSERIKRNLE 1094


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 35   SLAFTAPKMVAAKKQKKTIESINSRLAFGDEIGKILLRIQANFE 166
            ++A  + KM+A K  K T+E     +   +E+  +  RI+ N E
Sbjct: 1075 TMAHLSRKMIARKNSKATVEMPRKPVGPSEEVSTLSERIKRNLE 1118


>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 6 protein.
          Length = 2098

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 243 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSD 368
           +Y LLA  G+     + +ELGTA   YY +    +T  G  D
Sbjct: 252 FYCLLA--GLSREEKSELELGTAADYYYLIQGKTLTAEGRDD 291


>U14635-11|AAK84494.2|  500|Caenorhabditis elegans Glutamate-gated
           chloride channelprotein 4 protein.
          Length = 500

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = -3

Query: 192 ALLCLVEEFSKFACILSNIFPISSPKARRELIDSMVFFCFFAATILGAVNANDPHQEHKW 13
           A++ L+   +    I SN+ P+S  K+    + + V F FF+      VN      EH+ 
Sbjct: 300 AIVTLLTMITTSHAINSNLPPVSYAKSIDIWVGACVVFIFFSLIEYAVVNYVGILDEHRQ 359

Query: 12  KKK 4
            KK
Sbjct: 360 MKK 362


>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 195 PALLCLVEEFSKFACILSNIFPISSPKARRELIDS 91
           PAL    EEFSKF  +L  I+P   P     +ID+
Sbjct: 290 PALNLDSEEFSKFVTLLYAIYPAIDPLPLFFVIDN 324


>AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical
           protein F57H12.4 protein.
          Length = 454

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 1   LLFFPFVLLVRIISIYXSQNGCSKETEKDHRVN 99
           L  F  VLL   I IY S + CS   E + R+N
Sbjct: 93  LSLFDVVLLTSSIMIYPSMHQCSTIHETEQRLN 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,989,247
Number of Sequences: 27780
Number of extensions: 190967
Number of successful extensions: 466
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)