Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F07
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0305 - 29097478-29097598,29097766-29097866,29098136-290982...    29   3.2  
05_06_0120 + 25748882-25749297,25749411-25749600,25749682-257498...    29   3.2  

>05_07_0305 -
           29097478-29097598,29097766-29097866,29098136-29098288,
           29098404-29098542,29098649-29098719,29099022-29099333,
           29099605-29099903,29100011-29100271,29100365-29100471,
           29100588-29100739,29100816-29100970,29102946-29103141,
           29103340-29103468,29103540-29103641,29103736-29103889,
           29103970-29104058
          Length = 846

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +2

Query: 440 HTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKALSTFFTKSCIVGKWSPD 610
           H G++R+    IP+ +L    VF      S+  K NE  +    F      G++ PD
Sbjct: 523 HCGMSRDFLNNIPVAVLTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVEEGEFIPD 579


>05_06_0120 +
           25748882-25749297,25749411-25749600,25749682-25749888,
           25750234-25750401,25751155-25751390,25751617-25751764
          Length = 454

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 234 FSRGKPI-SFQLTPKTCTWP 290
           +SRGKP+ S  L P++C WP
Sbjct: 273 YSRGKPLLSATLAPRSCDWP 292


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,820,527
Number of Sequences: 37544
Number of extensions: 415337
Number of successful extensions: 943
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)