BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_F07
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 201 5e-54
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 201 5e-54
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 201 5e-54
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 25 0.63
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 24 1.1
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 23 2.6
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 23 2.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.4
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 22 5.9
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.8
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 201 bits (490), Expect = 5e-54
Identities = 95/194 (48%), Positives = 124/194 (63%), Gaps = 4/194 (2%)
Frame = +2
Query: 77 ICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQADF 256
+ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD
Sbjct: 23 VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82
Query: 257 VPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPINNLDQLK 424
V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPINN+ L+
Sbjct: 83 VAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLR 142
Query: 425 GLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKALSTFFTKSCIVGKWS 604
GLKSCHTGV RNVGYKIP+T L V ++D S +ENEL+ALS+ F+K C+VG WS
Sbjct: 143 GLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGCLVGTWS 202
Query: 605 PDPKTNSAWKXQYN 646
PDP N K Y+
Sbjct: 203 PDPAINRRLKETYS 216
Score = 45.2 bits (102), Expect = 6e-07
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 191 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 370
DC + + +CL +++ AD V + A K N ++ + Y +
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473
Query: 371 AVIVIHKDLPINNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 523
AV V+ K IN L+ L+ KSCH+G + G+ P+ L ++ + N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 201 bits (490), Expect = 5e-54
Identities = 95/194 (48%), Positives = 124/194 (63%), Gaps = 4/194 (2%)
Frame = +2
Query: 77 ICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQADF 256
+ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD
Sbjct: 23 VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82
Query: 257 VPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPINNLDQLK 424
V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPINN+ L+
Sbjct: 83 VAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLR 142
Query: 425 GLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKALSTFFTKSCIVGKWS 604
GLKSCHTGV RNVGYKIP+T L V ++D S +ENEL+ALS+ F+K C+VG WS
Sbjct: 143 GLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGCLVGTWS 202
Query: 605 PDPKTNSAWKXQYN 646
PDP N K Y+
Sbjct: 203 PDPAINRRLKETYS 216
Score = 45.2 bits (102), Expect = 6e-07
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 191 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 370
DC + + +CL +++ AD V + A K N ++ + Y +
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473
Query: 371 AVIVIHKDLPINNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 523
AV V+ K IN L+ L+ KSCH+G + G+ P+ L ++ + N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 201 bits (490), Expect = 5e-54
Identities = 95/194 (48%), Positives = 124/194 (63%), Gaps = 4/194 (2%)
Frame = +2
Query: 77 ICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQADF 256
+ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD
Sbjct: 23 VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82
Query: 257 VPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPINNLDQLK 424
V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPINN+ L+
Sbjct: 83 VAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLR 142
Query: 425 GLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKALSTFFTKSCIVGKWS 604
GLKSCHTGV RNVGYKIP+T L V ++D S +ENEL+ALS+ F+K C+VG WS
Sbjct: 143 GLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGCLVGTWS 202
Query: 605 PDPKTNSAWKXQYN 646
PDP N K Y+
Sbjct: 203 PDPAINRRLKETYS 216
Score = 45.2 bits (102), Expect = 6e-07
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 191 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 370
DC + + +CL +++ AD V + A K N ++ + Y +
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473
Query: 371 AVIVIHKDLPINNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 523
AV V+ K IN L+ L+ KSCH+G + G+ P+ L ++ + N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 25.0 bits (52), Expect = 0.63
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 4 VVDHLTELVGCLDNGSKIFHFDNPD 78
VV LT L+GCL G +I D D
Sbjct: 207 VVGGLTGLIGCLTLGRRILRLDAID 231
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 50 LKYFILITLICACVNA 97
+K F++I+ IC CV A
Sbjct: 1 MKTFVIISAICVCVGA 16
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = +2
Query: 50 LKYFILITLICACVNA---------AKTTYKICVPSQHLKACQDMVDIPTKSKVTLD 193
+K ++I+ IC CV+A T +C+ + + Q ++D + K+ +D
Sbjct: 1 MKTIVIISAICVCVSAMTLDELKSGLHTVQSVCM--KEIGTAQQIIDDINEGKINMD 55
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 50 LKYFILITLICACVNA 97
+K F++I IC CV A
Sbjct: 1 MKTFVIIFAICVCVGA 16
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -1
Query: 81 QIRVIKMKYFRAIVKATDKL 22
++ ++K + FR+ +KA+DKL
Sbjct: 653 KLMMLKHREFRSSIKASDKL 672
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 50 LKYFILITLICACVNA 97
+K ++I+ IC CV A
Sbjct: 1 MKTIVIISAICVCVGA 16
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 246 KPISFQLTPKTCTWPPKYPIRTSSFS 323
+PI + LT WP K + SS +
Sbjct: 209 EPIYYNLTMVKLNWPKKRVTKMSSIN 234
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 68 ITLICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTL 190
IT +C ++ + T +C+ S + D + KVT+
Sbjct: 737 ITTLCVAISLSATVTLVCLYSPKIYIILFQPDKNIRRKVTM 777
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 68 ITLICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTL 190
IT +C ++ + T +C+ S + D + KVT+
Sbjct: 827 ITTLCVAISLSATVTLVCLYSPKIYIILFQPDKNIRRKVTM 867
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,535
Number of Sequences: 438
Number of extensions: 4227
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -