Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_F06
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006729-2|AAM15613.1| 165|Caenorhabditis elegans Hypothetical ... 87 7e-18
AC006729-1|AAK93861.1| 319|Caenorhabditis elegans Hypothetical ... 87 7e-18
AC084159-6|AAK39360.1| 97|Caenorhabditis elegans Hypothetical ... 86 2e-17
U41007-12|AAA82272.1| 485|Caenorhabditis elegans Nucleoside tri... 31 0.66
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 29 2.0
U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical pr... 27 6.2
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 27 8.1
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF067945-13|AAC17676.2| 308|Caenorhabditis elegans Serpentine r... 27 8.1
>AC006729-2|AAM15613.1| 165|Caenorhabditis elegans Hypothetical
protein Y24D9A.8b protein.
Length = 165
Score = 87.0 bits (206), Expect = 7e-18
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +1
Query: 13 EIRELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXXNDIEKISLTESEFRWHLNEDH 192
EI+ L GCDLLTISP LL++LA+ D+ K+S+ E FRW LNED
Sbjct: 78 EIKGLVGCDLLTISPALLKQLAAETELAPVVLSTSHAKTLDLPKVSIDEKAFRWALNEDA 137
Query: 193 MATDKLSDGIRRFAADTRKLESLIK 267
MAT+KL++GIR FA D R LE LI+
Sbjct: 138 MATEKLAEGIRNFAKDARTLEKLIE 162
>AC006729-1|AAK93861.1| 319|Caenorhabditis elegans Hypothetical
protein Y24D9A.8a protein.
Length = 319
Score = 87.0 bits (206), Expect = 7e-18
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +1
Query: 13 EIRELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXXNDIEKISLTESEFRWHLNEDH 192
EI+ L GCDLLTISP LL++LA+ D+ K+S+ E FRW LNED
Sbjct: 232 EIKGLVGCDLLTISPALLKQLAAETELAPVVLSTSHAKTLDLPKVSIDEKAFRWALNEDA 291
Query: 193 MATDKLSDGIRRFAADTRKLESLIK 267
MAT+KL++GIR FA D R LE LI+
Sbjct: 292 MATEKLAEGIRNFAKDARTLEKLIE 316
>AC084159-6|AAK39360.1| 97|Caenorhabditis elegans Hypothetical
protein Y73B3A.2 protein.
Length = 97
Score = 85.8 bits (203), Expect = 2e-17
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +1
Query: 13 EIRELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXXNDIEKISLTESEFRWHLNEDH 192
EI+ L GCDLLTISP LL++LA+ D+ K+S+ E FRW LN+D
Sbjct: 10 EIKGLVGCDLLTISPALLKQLAAETEFAPVVLSTSHAKTLDLPKVSIDEKAFRWALNDDA 69
Query: 193 MATDKLSDGIRRFAADTRKLESLIK 267
MAT+KL++GIR FA D R LE LI+
Sbjct: 70 MATEKLAEGIRNFAKDARTLEKLIE 94
>U41007-12|AAA82272.1| 485|Caenorhabditis elegans Nucleoside
triphosphatase protein 1 protein.
Length = 485
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = -1
Query: 188 SSLRCQRNSDSVSDI-----FSMSFKAANFGSRTFFSGLSLLANSCSNLGLIVSKSQPAN 24
SS R QR+ SV + + + A + G+R F L L+ +N+ ++ +S+P
Sbjct: 5 SSERVQRSVRSVVETKNNIKYGVICDAGSSGTRLFVYTLKPLSGGLTNIDTLIHESEPVV 64
Query: 23 SRISPGI 3
+++PG+
Sbjct: 65 KKVTPGL 71
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 130 NDIEKISLTESEFRWHLNEDHMATDKLSDGI 222
N+ ++S TE +HL H ATD LSD +
Sbjct: 1209 NERNRVSWTELRTSFHLLYKHTATDSLSDSL 1239
>U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical
protein F28A12.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 148 SLTESEFRWHLNEDHMATDKLSDGIRRFAADTRKLESLIKTLL 276
S E+ FR+ ++ H++ D ++GI + +R + S IKT+L
Sbjct: 262 SFQENGFRYFIHPPHVSPDLAAEGIT--VSPSRVVNSAIKTVL 302
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 130 NDIEKI-SLTESEFRWHLNEDHMATDK 207
N I+K +L+E + +W LN HM T K
Sbjct: 130 NKIDKPGALSEDQLKWQLNIQHMCTGK 156
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 157 ESEFRWHLNEDHMATDKLSDGIRRFAADTRKLES 258
ES FR LNEDH +++ +G ++ +T +E+
Sbjct: 314 ESTFRV-LNEDHNENEEIGEGTKKVTEETTTVET 346
>AF067945-13|AAC17676.2| 308|Caenorhabditis elegans Serpentine
receptor, class x protein59 protein.
Length = 308
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 338 HFHVGIYLMYENLIFSSTTFIWIKFLGFYGFVILLIWDHVVDHSFFC 478
+F + +L + IF +T+F W+ GF+I++ V + F C
Sbjct: 238 YFILPAHLTNKWAIFFATSFAWVAVHALDGFIIMVFNPDVKRYLFSC 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,908,459
Number of Sequences: 27780
Number of extensions: 172964
Number of successful extensions: 403
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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