Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F04
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    28   0.29 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   1.6  

>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 496 LPGVHDKRDCVYTVLYTKNVLLTAEHFIKIHKDSRT 389
           L GV    DC+Y  +YT+N++ +    + IH  S T
Sbjct: 91  LGGVSGSEDCLYLNVYTQNLIGSRPVMVWIHGGSFT 126


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = -2

Query: 214  KNKVQKETYEYLSSQYNSDEFLKSKSKLNLEIGDSKIVVEVVNDGFSEPLLKISG 50
            K K+  ++ E  +  +  D+ LK   +L LEI   +  +  V +   +   +ISG
Sbjct: 877  KEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVRNENKDGYDRISG 931


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,795
Number of Sequences: 2352
Number of extensions: 11111
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)