Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F04
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74739-3|CAA98995.2| 3085|Homo sapiens 214K23.1 (breast cancer 2...    33   0.88 
U43746-1|AAB07223.1| 3418|Homo sapiens BRCA2 protein.                  33   0.88 
DQ897648-1|ABI74674.1| 2649|Homo sapiens breast and ovarian canc...    33   0.88 
AY436640-1|AAQ97181.1| 3418|Homo sapiens breast cancer 2, early ...    33   0.88 
AL445212-4|CAI40479.1| 3418|Homo sapiens breast cancer 2, early ...    33   0.88 
AL137247-6|CAI13195.1| 3418|Homo sapiens breast cancer 2, early ...    33   0.88 
AF348515-1|AAK29432.1|  715|Homo sapiens mutant early onset brea...    33   0.88 
X95152-1|CAA64484.1| 3418|Homo sapiens brca2 protein.                  32   1.5  

>Z74739-3|CAA98995.2| 3085|Homo sapiens 214K23.1 (breast cancer 2,
            early onset, protein) protein.
          Length = 3085

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


>U43746-1|AAB07223.1| 3418|Homo sapiens BRCA2 protein.
          Length = 3418

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


>DQ897648-1|ABI74674.1| 2649|Homo sapiens breast and ovarian cancer
            susceptibility protein 2 truncated variant protein.
          Length = 2649

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


>AY436640-1|AAQ97181.1| 3418|Homo sapiens breast cancer 2, early onset
            protein.
          Length = 3418

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


>AL445212-4|CAI40479.1| 3418|Homo sapiens breast cancer 2, early onset
            protein.
          Length = 3418

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


>AL137247-6|CAI13195.1| 3418|Homo sapiens breast cancer 2, early onset
            protein.
          Length = 3418

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


>AF348515-1|AAK29432.1|  715|Homo sapiens mutant early onset breast
           cancer susceptibility protein 2 protein.
          Length = 715

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331 VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
           +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 112 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 171

Query: 166 NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
            +D    SK+KL+  I    K V +  N  FS+ +  +   N
Sbjct: 172 YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 213


>X95152-1|CAA64484.1| 3418|Homo sapiens brca2 protein.
          Length = 3418

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -2

Query: 331  VLHGNLFNIHTANFINNHY----SFYVKLPNDYKEIF-KNETYCKNKVQKETYEYLSSQY 167
            +  G    I+TA+++ N+     S      ND   +  K +TY  N     +Y Y S + 
Sbjct: 1697 IFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV 1756

Query: 166  NSDEFLKSKSKLNLEIGD-SKIVVEVVNDGFSEPLLKISGGN 44
             +D  + SK+ L+  I    K V +  N  FS+ +  +   N
Sbjct: 1757 YNDSRILSKNNLDSGIEPVLKNVEDQKNTSFSKVISNVKDAN 1798


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,712,673
Number of Sequences: 237096
Number of extensions: 1324655
Number of successful extensions: 2714
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2714
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)