Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_F04
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical pr... 31 0.54
AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical ... 31 0.54
Z81557-14|CAN99712.1| 321|Caenorhabditis elegans Hypothetical p... 29 2.2
Z81557-13|CAB04530.2| 303|Caenorhabditis elegans Hypothetical p... 29 2.2
U64847-9|AAQ23119.1| 426|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical ... 29 2.9
Z78410-11|CAB01639.2| 315|Caenorhabditis elegans Hypothetical p... 29 3.8
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC006776-5|AAF60625.1| 358|Caenorhabditis elegans Serpentine re... 28 5.0
Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z46242-4|CAA86331.1| 340|Caenorhabditis elegans Hypothetical pr... 28 6.6
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 8.7
U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily ass... 27 8.7
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 31.5 bits (68), Expect = 0.54
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = -2
Query: 424 EHFIKIHKDSRTICLKQPNKTLQ-KLVQESSEVLHGNLFNIHTANFINNHYSFYVKLPND 248
+ F+KIH++ T+ +K+ N+T Q K ++ +++ L I+T F + + Y +
Sbjct: 363 QDFLKIHREHETVVIKKLNETGQLKSLKAHLSMINQQLELINT--FPIHDINVYAR---- 416
Query: 247 YKEIFKNETYCKNKVQKETYEYLSSQYNSDEFLKSKSKLNLEIGDSKIVVEVVNDGFSEP 68
Y ++ Y ++K + E Y + ++ +LK K+ +L I +I V N +
Sbjct: 417 YAQLDIGWIYSQHKDELEKYADYFNCLQNNAYLKYKA--SLSIATKRISDHVYNSTYQNS 474
Query: 67 LLKISG 50
+ G
Sbjct: 475 FNNLLG 480
>AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 31.5 bits (68), Expect = 0.54
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = -2
Query: 424 EHFIKIHKDSRTICLKQPNKTLQ-KLVQESSEVLHGNLFNIHTANFINNHYSFYVKLPND 248
+ F+KIH++ T+ +K+ N+T Q K ++ +++ L I+T F + + Y +
Sbjct: 363 QDFLKIHREHETVVIKKLNETGQLKSLKAHLSMINQQLELINT--FPIHDINVYAR---- 416
Query: 247 YKEIFKNETYCKNKVQKETYEYLSSQYNSDEFLKSKSKLNLEIGDSKIVVEVVNDGFSEP 68
Y ++ Y ++K + E Y + ++ +LK K+ +L I +I V N +
Sbjct: 417 YAQLDIGWIYSQHKDELEKYADYFNCLQNNAYLKYKA--SLSIATKRISDHVYNSTYQNS 474
Query: 67 LLKISG 50
+ G
Sbjct: 475 FNNLLG 480
>Z81557-14|CAN99712.1| 321|Caenorhabditis elegans Hypothetical
protein F59A1.11b protein.
Length = 321
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 356 LQCFIWLLQTYCSRIF-VNFDKMFCS*QNILCIQNCINTIPFVMD 487
L IWL CSR+F VN ++ Q ++ +Q+ IN I V +
Sbjct: 40 LSSCIWLHVAICSRLFIVNNFRVISDYQRLIIVQSVINIIASVFE 84
>Z81557-13|CAB04530.2| 303|Caenorhabditis elegans Hypothetical
protein F59A1.11a protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 356 LQCFIWLLQTYCSRIF-VNFDKMFCS*QNILCIQNCINTIPFVMD 487
L IWL CSR+F VN ++ Q ++ +Q+ IN I V +
Sbjct: 40 LSSCIWLHVAICSRLFIVNNFRVISDYQRLIIVQSVINIIASVFE 84
>U64847-9|AAQ23119.1| 426|Caenorhabditis elegans Hypothetical
protein F08F3.9b protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 157 EFLKSKSKLNLEIGDSKIVVEVVNDGFSEPLLK-ISGGNMSIGYDIKKFFC 8
+ SK +NLE GD++++ SEPL S GN I YD C
Sbjct: 375 QLASSKPAINLESGDAEVLSN--GRSCSEPLYNDESNGNFDISYDSSDDLC 423
>AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical
protein F37C4.8 protein.
Length = 324
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 265 VKLPNDYKEIFKNETYCKNKVQKETYEYLSSQYNSDEFLKSKSKLNLEIGD 113
+K+P + E+F+ + ++ + + +E YNS E L K N+E D
Sbjct: 141 LKVPPETLEVFQAKDCAQHSQKLDCWELAKCLYNSTEMLPEKEVTNVEERD 191
>Z78410-11|CAB01639.2| 315|Caenorhabditis elegans Hypothetical
protein C51E3.4 protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 301 TANFI--NNHYSFYVKLPNDYKEIFKNETYCKNKVQKETYEYLSS 173
T NF +N + FY + ++Y+E+ K+ CKNK +E S+
Sbjct: 251 TVNFAAASNAFIFYA-INSEYREVIKSLFGCKNKTNTPAFEASST 294
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -2
Query: 637 YTTLSSGNQILKTVTI---KVREYLKTVKYLIPLKSKLNRVNVNIKLVVKLPGVHDKRDC 467
+T S QI +T T K E +TV+ L +LN + K + ++ DC
Sbjct: 1537 HTPQHSSEQIKQTTTTVLQKTPEIRETVEKT-GLARELNSAQIGQKKGFTIDNINKSSDC 1595
Query: 466 VYTVLYTKNVLLTAEHFIKIHKDSRTI 386
NV++T EH ++I+ D I
Sbjct: 1596 --------NVIITGEHLVEIYLDHEII 1614
>AC006776-5|AAF60625.1| 358|Caenorhabditis elegans Serpentine
receptor, class w protein90 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = -2
Query: 301 TANFINNHY--SFYVKLPNDYKEIFKNETYCKNKVQKETYEYLSSQYNS----DEFLKSK 140
TA FI+ + SFY+ + N ++K + C + Q E + QYNS ++++ +
Sbjct: 156 TAFFISFAFTISFYLHVENVQIGVWKPDVQCSHSTQIEEIPVYAQQYNSLFLMNDYILGR 215
Query: 139 SKLNLEIGDSKIV 101
++ +E +K++
Sbjct: 216 IRMFIEAVFAKLI 228
>Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical
protein F08H9.12 protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 160 HYYIDYLNIHM---FPFVPYFYNMFRF*IFLCNHWVI 261
++Y+ LN H FP V +FY M F FL + +++
Sbjct: 36 YFYVHNLNWHKEKDFPIVQFFYKMVLFSYFLFSTFIL 72
>Z46242-4|CAA86331.1| 340|Caenorhabditis elegans Hypothetical
protein F35G12.5 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 556 LIPLKSK-LNRVNVNIKLVVKLPGVHDKRDCVYTVLY 449
++P S+ +NRV VN V+K G H+ DC ++++Y
Sbjct: 217 IMPSDSENMNRVKVN--QVIKFLGFHEIGDCEFSMIY 251
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 202 QKETYEYLSSQYNSDEFLKSKSKLNLEIGDSKIVVEVVNDGFSEPLL 62
+ +T + SS YN+ E KS K +E + VEV N + LL
Sbjct: 357 ENQTTQTTSSSYNAKEEKKSYRKCKVEEWNDVTTVEVPNQSVHKKLL 403
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = -2
Query: 406 HKDSRTICLKQP--NKTLQKLVQESSEVLHGNLFNI--HTANFINNHYSFYVK-LPNDYK 242
++ S +C+ QP + + +V+ S + ++ LF++ H+ N HY Y+K L D
Sbjct: 375 YQGSENVCVGQPIDHAAVDDIVKTSGDNVY-ELFSVMVHSGNAAGGHYFAYIKNLDQDRW 433
Query: 241 EIFKNET 221
+F N+T
Sbjct: 434 YVF-NDT 439
>U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 226 protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Frame = -2
Query: 550 PLKSKLNRVNVNIKLVVKLPG----VHDKRDCVYTVLYT-----KNVLLTAEHFIKIHKD 398
PLK K +N + ++++++ G +H +D Y ++V+ EH + KD
Sbjct: 80 PLK-KCPDLNTDERMLIRIVGRYKDIHSGKDKSIDGFYNNRESKRSVMEIWEHCADMKKD 138
Query: 397 SRTICLKQPNKTLQKLVQ--ESSEVLHGNL-FNIHTANFINNH 278
+K KT ++ Q +++ ++ + F +H+ NFIN H
Sbjct: 139 ENA--MKSFKKTYDRVKQFGDTNHLMDEEVTFQLHSRNFINRH 179
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -2
Query: 565 VKYLIPLKSKLNRVNVNIKLVVKLPGVHDKRD 470
V+YLI + +N+++ N +L ++L G +KRD
Sbjct: 11 VEYLIRNGADVNKIDSNYQLPIELAGKVEKRD 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,190,990
Number of Sequences: 27780
Number of extensions: 262321
Number of successful extensions: 836
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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