Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F02
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.22 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.38 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   0.87 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   2.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 175 GMVHRICFTTCLIFCVITIYYMN 243
           G++  + FT+  IF V++I+YM+
Sbjct: 234 GLILLLMFTSHFIFIVVSIFYMS 256


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 3   QLILVSYDYNIRRLSWFINVHVL 71
           Q  L+ Y  N RR+S F+N+ +L
Sbjct: 109 QFGLLGYSINYRRISIFVNLAIL 131


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 0.87
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 42  LSWFINVHVLCNCCW*PRDNSVW*SIPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLR 221
           L  FI   VLC  C  P          +  T+ STI      C +H P +  H +  F+ 
Sbjct: 3   LDGFIRKFVLCPECENPETEL------LVSTKRSTISQGCKACGYHSPLESNHKLVTFIL 56

Query: 222 DN 227
            N
Sbjct: 57  KN 58


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 117 IPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLRDNHLL 236
           + + IT    I GNI    W+ P++    +P+ +   H+L
Sbjct: 139 LAMTITGPLVIIGNIAMELWNMPRENIEPLPNVILACHML 178


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 238 MNKLSQKKYAVVAPQPAAVKSRRHK 312
           M  ++ KK+  + P P+ +K+ R K
Sbjct: 614 MGYMAAKKHLEINPDPSILKNLRQK 638


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 30  NIRRLSWFINVHVLCNCCW*PRDNSV----W*SIPIEITRSSTIDG 155
           N  R S F N     N C+ PR+NS+    +   P E  RS+ IDG
Sbjct: 387 NSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSP-ESNRSNEIDG 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,810
Number of Sequences: 336
Number of extensions: 1909
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)