SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_F02
         (408 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057233-1|AAH57233.1|  162|Homo sapiens keratinocyte associated...    98   1e-20
BC048205-1|AAH48205.1|  146|Homo sapiens KRTCAP2 protein protein.      98   1e-20
BC029806-1|AAH29806.1|  162|Homo sapiens keratinocyte associated...    98   1e-20
AL607067-2|CAH71196.1|  162|Homo sapiens keratinocyte associated...    98   1e-20
AY157577-1|AAO13161.2|  114|Homo sapiens keratinocytes associate...    95   6e-20
BC057395-1|AAH57395.1| 1433|Homo sapiens HISPPD2A protein protein.     29   8.0  
BC050263-1|AAH50263.1|  817|Homo sapiens HISPPD2A protein protein.     29   8.0  
AF543190-1|AAN40768.1| 1194|Homo sapiens KIAA0377 splice variant...    29   8.0  
AF502589-1|AAP30845.1| 1194|Homo sapiens KIAA0377 splice variant...    29   8.0  
AF502588-1|AAP30844.1| 1408|Homo sapiens KIAA0377 splice variant...    29   8.0  
AF502587-1|AAP30843.1| 1408|Homo sapiens KIAA0377 splice variant...    29   8.0  
AF502586-1|AAP30842.1| 1430|Homo sapiens KIAA0377 splice variant...    29   8.0  
AB002375-1|BAA20831.2| 1412|Homo sapiens KIAA0377 protein.             29   8.0  

>BC057233-1|AAH57233.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = +1

Query: 31  IFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTC 207
           I GG LGS +F+F +TA  NLE ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC
Sbjct: 64  IQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTC 123

Query: 208 LIFCVITIYYMNKLSQKKYAVVAP--QPAAVKSRRHK*N 318
            IF ++ +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 124 FIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162


>BC048205-1|AAH48205.1|  146|Homo sapiens KRTCAP2 protein protein.
          Length = 146

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = +1

Query: 31  IFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTC 207
           I GG LGS +F+F +TA  NLE ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC
Sbjct: 48  IQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTC 107

Query: 208 LIFCVITIYYMNKLSQKKYAVVAP--QPAAVKSRRHK*N 318
            IF ++ +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 108 FIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 146


>BC029806-1|AAH29806.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = +1

Query: 31  IFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTC 207
           I GG LGS +F+F +TA  NLE ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC
Sbjct: 64  IQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTC 123

Query: 208 LIFCVITIYYMNKLSQKKYAVVAP--QPAAVKSRRHK*N 318
            IF ++ +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 124 FIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162


>AL607067-2|CAH71196.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = +1

Query: 31  IFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTC 207
           I GG LGS +F+F +TA  NLE ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC
Sbjct: 64  IQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTC 123

Query: 208 LIFCVITIYYMNKLSQKKYAVVAP--QPAAVKSRRHK*N 318
            IF ++ +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 124 FIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162


>AY157577-1|AAO13161.2|  114|Homo sapiens keratinocytes associated
           protein 2 protein.
          Length = 114

 Score = 95.5 bits (227), Expect = 6e-20
 Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
 Frame = +1

Query: 31  IFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTC 207
           I GG LGS +F+F +TA  NLE ++FGK FQ K+ PE++L + ++L A+ ++HR+C TTC
Sbjct: 16  IQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLALFASSLIHRVCVTTC 75

Query: 208 LIFCVITIYYMNKLSQKKYAVVAP--QPAAVKSRRHK*N 318
            IF ++ +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 76  FIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 114


>BC057395-1|AAH57395.1| 1433|Homo sapiens HISPPD2A protein protein.
          Length = 1433

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>BC050263-1|AAH50263.1|  817|Homo sapiens HISPPD2A protein protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>AF543190-1|AAN40768.1| 1194|Homo sapiens KIAA0377 splice variant 4
           protein.
          Length = 1194

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>AF502589-1|AAP30845.1| 1194|Homo sapiens KIAA0377 splice variant 4
           protein.
          Length = 1194

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>AF502588-1|AAP30844.1| 1408|Homo sapiens KIAA0377 splice variant 3
           protein.
          Length = 1408

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>AF502587-1|AAP30843.1| 1408|Homo sapiens KIAA0377 splice variant 2
           protein.
          Length = 1408

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>AF502586-1|AAP30842.1| 1430|Homo sapiens KIAA0377 splice variant 1
           protein.
          Length = 1430

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 366 QIPWSIPTEAEDIPIVPTTSG 386


>AB002375-1|BAA20831.2| 1412|Homo sapiens KIAA0377 protein.
          Length = 1412

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 194 QILWTMPAAINDIPIDSTTSG 132
           QI W++P    DIPI  TTSG
Sbjct: 372 QIPWSIPTEAEDIPIVPTTSG 392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,124,499
Number of Sequences: 237096
Number of extensions: 1010004
Number of successful extensions: 1592
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -