Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_F01
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 105 2e-23
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 105 2e-23
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 105 2e-23
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 38 0.006
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 38 0.006
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 38 0.006
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 37 0.008
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 37 0.008
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 37 0.008
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 37 0.011
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 37 0.011
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 36 0.015
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 36 0.019
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 34 0.077
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 33 0.10
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 33 0.10
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 32 0.24
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 32 0.31
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 31 0.41
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 2.9
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 28 5.1
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 28 5.1
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 28 5.1
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 28 5.1
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 28 5.1
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 28 5.1
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 5.1
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 28 5.1
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 105 bits (253), Expect = 2e-23
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +1
Query: 127 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 306
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 307 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 483
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 484 XTVPEL 501
V EL
Sbjct: 121 KEVNEL 126
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 105 bits (253), Expect = 2e-23
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +1
Query: 127 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 306
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 307 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 483
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 484 XTVPEL 501
V EL
Sbjct: 121 KEVNEL 126
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 105 bits (253), Expect = 2e-23
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +1
Query: 127 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 306
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 307 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 483
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 484 XTVPEL 501
V EL
Sbjct: 121 KEVNEL 126
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPEL 501
GL N+GNTC+M+AT+QCL P L
Sbjct: 25 GLFNMGNTCFMSATLQCLFQTPGL 48
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 37.5 bits (83), Expect = 0.006
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +1
Query: 169 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 339
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 340 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLXTVPELXNALLN 519
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 520 YDKS 531
+ S
Sbjct: 139 FRPS 142
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 37.5 bits (83), Expect = 0.006
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +1
Query: 169 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 339
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 340 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLXTVPELXNALLN 519
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 520 YDKS 531
+ S
Sbjct: 139 FRPS 142
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 391 NEAELATAMDMPE--GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
+ A+L+ + P GL+N GN CY NA +QCL V L L+ D
Sbjct: 556 SNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 602
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 37.1 bits (82), Expect = 0.008
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 424 PEGLINLGNTCYMNATVQCLXTVPELXNALLN 519
P G+ N+GNTC+MNA +Q L ++ E +++
Sbjct: 377 PRGMRNVGNTCFMNAVLQALASISEFREYIMS 408
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
GL+N TCY+N+ VQ L PE NA+ +++
Sbjct: 89 GLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWE 120
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 376 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLXTVPELXNALLNYDKSSTG 540
F+ N E +++ +P GL N GNTCYMNA +Q L + P L + G
Sbjct: 29 FLTSRNGEEASSSRLVP-GLANQGNTCYMNALLQGLASCPSFVGWLKSLKPQDIG 82
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYDKS 531
GL+N GNTCY N+ +Q L +LNY ++
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQT 61
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 35.9 bits (79), Expect = 0.019
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALL 516
GL NLGNTC+M + QCL +P L L
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFL 304
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 33.9 bits (74), Expect = 0.077
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXN---ALLNYDKSSTGGD 546
G+ N G TCYMNA +Q L VP L AL N D GD
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGD 1809
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 33.9 bits (74), Expect = 0.077
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXN---ALLNYDKSSTGGD 546
G+ N G TCYMNA +Q L VP L AL N D GD
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGD 1806
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 33.9 bits (74), Expect = 0.077
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXN---ALLNYDKSSTGGD 546
G+ N G TCYMNA +Q L VP L AL N D GD
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGD 1809
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 33.9 bits (74), Expect = 0.077
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXN---ALLNYDKSSTGGD 546
G+ N G TCYMNA +Q L VP L AL N D GD
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGD 1806
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 394 EAELATAMDMPEGLINLGNTCYMNATVQCLXTVPELXNALLNY 522
E++ + G+ N ++C+++ VQ L VP+L + LLN+
Sbjct: 22 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNF 64
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 394 EAELATAMDMPEGLINLGNTCYMNATVQCLXTVPELXNALLNY 522
E++ + G+ N ++C+++ VQ L VP+L + LLN+
Sbjct: 69 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNF 111
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTV 492
GL+N G++CYMN+ +Q L TV
Sbjct: 320 GLVNTGSSCYMNSVLQALVTV 340
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALL 516
GL N+GNTC+MNA +Q L EL L
Sbjct: 424 GLRNIGNTCFMNAVLQMLVNNIELREYFL 452
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCL 483
G +N GNTCYMNA +Q L
Sbjct: 183 GYLNFGNTCYMNAVLQLL 200
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 433 LINLGNTCYMNATVQCLXTVPEL 501
L N GN+CY N+T+Q L + P L
Sbjct: 284 LYNTGNSCYFNSTMQALSSCPSL 306
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1307
Score = 31.5 bits (68), Expect = 0.41
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNAL 513
GL N GNTC++N Q L ++P+ + L
Sbjct: 200 GLYNSGNTCWLNCLSQVLYSIPKFRSIL 227
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 28.7 bits (61), Expect = 2.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 433 LINLGNTCYMNATVQCL 483
L+N GN+C++N+T+Q L
Sbjct: 147 LVNTGNSCFLNSTMQAL 163
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 28.7 bits (61), Expect = 2.9
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 418 DMPEGLINLGNTCYMNATVQCL 483
++ + L+N GN+CY N+T+Q +
Sbjct: 31 ELRKRLVNTGNSCYYNSTLQAM 52
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
GL N G TCYMN+ +Q A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
GL N G TCYMN+ +Q A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 430 GLINLGNTCYMNATVQCLXTVPELXNALLNYD 525
GL N G TCYMN+ +Q A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 433 LINLGNTCYMNATVQCL 483
L+N GN+CY N+T+Q +
Sbjct: 216 LVNTGNSCYYNSTMQAV 232
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 329 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 427
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 113 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 145
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 329 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 427
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 329 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 427
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 329 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 427
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 329 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 427
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 113 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 145
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 329 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 427
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 397 AELATAMDMPEGLINLGNTCYMNATVQCLXTVPELXNALLNYDKSST 537
AEL ++D P GN CY AT Q VP+ NA N + T
Sbjct: 7 AELYPSVD-PNHFGADGNPCYDRATRQPQRCVPDFVNAAFNLEVQVT 52
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 433 LINLGNTCYMNATVQCL 483
L+N GN+CY N+T+Q +
Sbjct: 216 LVNTGNSCYYNSTMQAV 232
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 163 VEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTW 285
+E D V + QI A+TG QP K ++ W
Sbjct: 359 IESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEYEEEDW 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,665,097
Number of Sequences: 27780
Number of extensions: 270785
Number of successful extensions: 686
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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