Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_E24
(373 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 128 3e-31
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 125 3e-30
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 91 4e-20
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 29 0.23
SPCC830.10 |||nucleoside triphosphatase |Schizosaccharomyces pom... 28 0.54
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 3.8
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 25 3.8
SPCPB16A4.02c |||conserved fungal protein|Schizosaccharomyces po... 25 3.8
SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit T... 25 3.8
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 5.0
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 25 5.0
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 5.0
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 5.0
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 5.0
SPBC36B7.04 |||tRNA dihydrouridine synthase Dus1 |Schizosaccharo... 24 8.8
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 24 8.8
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 24 8.8
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 128 bits (309), Expect = 3e-31
Identities = 54/96 (56%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 LYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKL 180
+YKRGF K++ QRIP++ N+I+E L K++I+ VEDLIHEI+TVG FK A+NFLWPFKL
Sbjct: 155 IYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKL 214
Query: 181 NNPTGGWR-KKTIHYVDGGDFGNREDKINDLLRRMV 285
++P GGWR +K H+++GGD G R++ IN L+++M+
Sbjct: 215 SSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKML 250
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 125 bits (301), Expect = 3e-30
Identities = 52/96 (54%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 LYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKL 180
LYKRGF K++ QRI ++ N+I+E L K++I+ +EDLIHEI+TVG FK A+NF+WPF+L
Sbjct: 156 LYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQL 215
Query: 181 NNPTGGWR-KKTIHYVDGGDFGNREDKINDLLRRMV 285
++P GGWR +K H+++GGD G R++ IN L+R+M+
Sbjct: 216 SSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKML 251
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 91.5 bits (217), Expect = 4e-20
Identities = 40/96 (41%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 LYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKL 180
+YKRGF K++GQRI ++ N+++E+ L K+++I +ED+IHEI+ VG FK + FLWPF L
Sbjct: 154 IYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTL 213
Query: 181 NNPTGG-WRKKTIHYVDGGDFGNREDKINDLLRRMV 285
KK H+ +G G ++IN+L+++ V
Sbjct: 214 TPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKKQV 249
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 29.1 bits (62), Expect = 0.23
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 206 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 72
LR P L L+GH + L +SP + SST +C+W L
Sbjct: 311 LRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL 355
>SPCC830.10 |||nucleoside triphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 188
Score = 27.9 bits (59), Expect = 0.54
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 219 MNGLLAPTTSWIVQFEGPQEITRVLELFSNSE 124
MNGL P W + GP + R++ F E
Sbjct: 75 MNGLPGPYVKWFLNSVGPDGLYRMVSAFDTKE 106
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.0 bits (52), Expect = 3.8
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -3
Query: 209 FLRQPPVGLFNL---KGHRKLLAYLNFSP-TVKISWMRSSTQIMLCLWSLFSTMLLEVIG 42
+LR+P + N KG L+ +F+ T + S + S LC F+ E IG
Sbjct: 854 YLRKPHMSRENFGISKGSGGLIGSFDFNKFTRQASKVHGSWISSLCSSQAFA----EFIG 909
Query: 41 IRCPLSLANPRL 6
RC L L +PR+
Sbjct: 910 DRCELDLNDPRV 921
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 25.0 bits (52), Expect = 3.8
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -3
Query: 185 LFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSLFSTMLLEVIGI 39
LF+L G L ++ + T+K SW ++ + L + ++++ I
Sbjct: 76 LFSLFGSCMLFRFIKYPSTIKDSWNHHLEKLFIATCLLSISTFIDMLAI 124
>SPCPB16A4.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 328
Score = 25.0 bits (52), Expect = 3.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 195 WLAQEDHSLCRRGRLW*PRRQDQRSSQED 281
WL ++ H+ + +LW R+DQ S +D
Sbjct: 31 WLIKKGHATSTKKQLWAVLRRDQLSFYKD 59
>SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit Tfb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.0 bits (52), Expect = 3.8
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -2
Query: 258 LVFAVTKVSPVDIMNGLLAPTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLNTDNVVF 82
L+ + KVS +++G L+ ++I Q + + + +FS + D+ + + T N +F
Sbjct: 121 LMSSTDKVSRKTMISGALSRALAYINQVQNKNTLRSRILIFSLTGDVALQYIPTMNCIF 179
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 24.6 bits (51), Expect = 5.0
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -2
Query: 165 QEITRVLELFSNSEDLMDEVLNTDNVVFMEPLLNNAVGSDWYTLST 28
QE ++ L S+++ L+D ++ M+P+ N+ SD +TL T
Sbjct: 124 QETSKDLCRSSSTQHLLDHQTTDSTIIDMKPVSTNS-KSDVFTLYT 168
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 24.6 bits (51), Expect = 5.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 150 VLELFSNSEDLMDEVLNTDNVVFMEPLLNNAVGSDWYTL 34
+L +F+ +D M L T+N + +L +A W TL
Sbjct: 319 LLPIFNKVQDRMRYSLLTNNAIVFALVLGSAFYHSWITL 357
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 5.0
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -2
Query: 228 VDIMNGLLAPTTSWIVQFEGPQEITRVLELFSN-----SEDLMDEVLNTDNVVFMEPLLN 64
++I + L AP+ SW + E+ +L + S + + +E+ TD V LL
Sbjct: 763 LEIDSNLFAPSNSWFNSWHSRLELDSILAIISQFSLPVYKKMNEELSTTDEAV---KLLA 819
Query: 63 NAVGSD 46
N+V +D
Sbjct: 820 NSVLND 825
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 24.6 bits (51), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 153 RVLELFSNSEDLMDE--VLNTDNVVFMEPLLNN 61
RV E+F +S DL++E + DNV EP N
Sbjct: 300 RVAEIFKDSPDLLEEFKLFLPDNVDSTEPSTPN 332
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.6 bits (51), Expect = 5.0
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = -2
Query: 303 YKSIYLNHPPEKIVDLVFAVTKVSPVDIMNGLLAPTTSWIVQFEGPQEITRVLELFSNSE 124
+ ++ HP + + K+ + I++ L VQ + E+ ++ LF NSE
Sbjct: 1732 FYEVFFQHPSTNVYANDEGI-KIGALQIISFFLKNVPEITVQHQ--TEMLKMCSLFGNSE 1788
Query: 123 DLMDEVLN 100
D+M + L+
Sbjct: 1789 DVMIKQLS 1796
>SPBC36B7.04 |||tRNA dihydrouridine synthase Dus1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 23.8 bits (49), Expect = 8.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 141 LFSNSEDLMDEVLNTDNVVFMEPLLNNAVGSD 46
LF SED ++V +T + PL+ G+D
Sbjct: 54 LFGESEDYRNKVFSTRTIPEERPLIIQFCGND 85
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 23.8 bits (49), Expect = 8.8
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 25 LSGQRIPITSNSIVEKRLHKHNIICVE-DLIHEIFTVGEKFKYASNFLWPFK 177
L+G +I I+ + ++ R+ VE +L H++ + K+AS F PF+
Sbjct: 159 LAGAQI-ISPSDCMDGRVKAIKQKLVELELSHKVCVISYSAKFASGFFGPFR 209
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 23.8 bits (49), Expect = 8.8
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 79 HKH-NIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWRKKTIHYVD 228
H+H + +C + + VGE + F+ F +N T KKT+ +V+
Sbjct: 106 HQHYSRVCRNGIDINLIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVE 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,384,611
Number of Sequences: 5004
Number of extensions: 27286
Number of successful extensions: 98
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 118158644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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