Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_E14
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.9  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 561 SERTEEDADPQPRHQEPRGQKRYLFEHCS*NAVY*SCQTHTAIRNASN 418
           S  + E++  +        +KR   EHC     Y +   HT I N+ +
Sbjct: 756 SSTSSEESREEKATTSLEAEKREKSEHCEKGKEYYAASFHTDIGNSQS 803


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 434 YVMLVITIIVCILFV 390
           Y++L IT+I  ++FV
Sbjct: 51  YIVLPITVIYAVIFV 65


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/71 (21%), Positives = 28/71 (39%)
 Frame = +1

Query: 229 KVKTVSAQTHRRLLQV*RMWDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQT 408
           K+  +  Q  + + +   M D    Q  +  T        C L    +  ++A T  +QT
Sbjct: 759 KIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 818

Query: 409 IIVITSITYCS 441
            + +T I+  S
Sbjct: 819 SVGVTEISLAS 829


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/71 (21%), Positives = 28/71 (39%)
 Frame = +1

Query: 229  KVKTVSAQTHRRLLQV*RMWDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQT 408
            K+  +  Q  + + +   M D    Q  +  T        C L    +  ++A T  +QT
Sbjct: 849  KIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 908

Query: 409  IIVITSITYCS 441
             + +T I+  S
Sbjct: 909  SVGVTEISLAS 919


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,009
Number of Sequences: 438
Number of extensions: 3719
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)