Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_E13
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0619 - 19382172-19382366,19382453-19382545,19382621-193827...    31   1.1  
04_04_1576 - 34551095-34552645                                         29   4.3  
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767...    28   7.5  
04_04_1229 - 31906854-31907300,31907986-31908181,31908631-319087...    27   9.9  

>08_02_0619 -
           19382172-19382366,19382453-19382545,19382621-19382702,
           19382793-19382903,19383323-19383681,19384330-19384533,
           19384582-19384756,19384885-19385474,19385555-19385800
          Length = 684

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/87 (26%), Positives = 40/87 (45%)
 Frame = +3

Query: 153 GKYSEGIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPSEFTCNFSDIVITSI 332
           G + +G  A F  F+  +L   F   +   +N+  A+  E ++   +F    +D  +  +
Sbjct: 489 GAFKDGPNANFA-FSFKDL-HVFFKMDKMDINLVAAWYLEHYI---QFLVYPTDQTVVVL 543

Query: 333 VPGDYDGDAYMDILLTTQNVNNTSKFH 413
            P DYD DAYM+ L      ++  K H
Sbjct: 544 DPADYDKDAYMEFLCLLNLAHDRYKKH 570


>04_04_1576 - 34551095-34552645
          Length = 516

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +3

Query: 285 PSEFTCNFSDIVITSIVPGDYDGDAYMDILLTTQNVNNTSKFHNVSILWGGMPTLNCSDA 464
           P+E     SD+++  I P +Y   A  +      N+N   K H   I  GG   +  ++A
Sbjct: 326 PAESLRVVSDMILDGIRPNNYTIVAAANACANLANLNQGRKIHGYVIKLGGDSNVGVNNA 385

Query: 465 L 467
           L
Sbjct: 386 L 386


>05_03_0362 -
           12973488-12974251,12975346-12975580,12976410-12976738,
           12977277-12977404,12977695-12977879,12977972-12978165,
           12978239-12978368,12978507-12978566,12979037-12979059,
           12979158-12979218,12979677-12979748,12979804-12979924,
           12980351-12980415,12980973-12981089,12981970-12982239
          Length = 917

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 220 SLLKIVQPSTFFLHMTKSLF*GHPNLHATFLILLSLVL 333
           SL K + PST  LH     F   P+LH+TFL LLS  +
Sbjct: 392 SLHKKLFPSTTSLHQELICF-ELPSLHSTFLDLLSATI 428


>04_04_1229 -
           31906854-31907300,31907986-31908181,31908631-31908756,
           31909962-31910329,31910680-31910835,31910968-31911168,
           31911230-31911375,31911439-31911865,31912527-31912627,
           31913197-31913254
          Length = 741

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 188 TECSYNSFGIFSKRTASNITYKRACRQNYIK*QNKNCVHHFRT*SYLINKF 36
           +E S  S  +F ++   N  YKR C +   K QNKN  +  R   +  NK+
Sbjct: 492 SEKSLYSVLLFERKILENY-YKRKCEKKNGKKQNKNPCYRCRFWGWFYNKW 541


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,784,262
Number of Sequences: 37544
Number of extensions: 303599
Number of successful extensions: 621
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)