Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_E13
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 5.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 5.0
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical
protein ZK637.3 protein.
Length = 599
Score = 36.7 bits (81), Expect = 0.014
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Frame = +3
Query: 168 GIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPSEFTCNFS----------DI 317
G + AFGDFN+D TD V N + + L S+FT S D
Sbjct: 29 GKVCAFGDFNADRNTDILVFANGTLTINYQETKLLDVLEASKFTPGTSFAISKPSLNADF 88
Query: 318 VITSIVPGDYDGDAYMDILLTTQN 389
V S+ GD++GD+ +D+L++ ++
Sbjct: 89 VECSV--GDFNGDSRLDVLVSIRD 110
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2188 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2221
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2281 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2094 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2127
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2281 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2188 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2221
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2281 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2094 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2127
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2281 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 628 NFSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 524
+F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2280 SFTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2313
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 375 LTTQNVNNTSKFHNVSILWGGMPTLNCSDAL 467
LT ++NT +FH + +GG PT D L
Sbjct: 631 LTELLLDNTIEFHTIIFAFGGTPTFKKQDFL 661
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,907,733
Number of Sequences: 27780
Number of extensions: 317530
Number of successful extensions: 888
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -